KEGG   Typha angustifolia (narrow-leaf cattail): 140762387
Entry
140762387         CDS       T11061                                 
Name
(RefSeq) ras-related protein Rab5-like
  KO
K07887  Ras-related protein Rab-5A
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang04144  Endocytosis
tang04145  Phagosome
tang04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:tang00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    140762387
   04145 Phagosome
    140762387
   04148 Efferocytosis
    140762387
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tang04131]
    140762387
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tang04147]
    140762387
   04031 GTP-binding proteins [BR:tang04031]
    140762387
Membrane trafficking [BR:tang04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    140762387
 Endosome - Lysosome transport
    140762387
Exosome [BR:tang04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   140762387
  Exosomal proteins of other body fluids (saliva and urine)
   140762387
  Exosomal proteins of colorectal cancer cells
   140762387
  Exosomal proteins of bladder cancer cells
   140762387
GTP-binding proteins [BR:tang04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    140762387
SSDB
Motif
Pfam: Ras Roc Arf AAA_16 RsgA_GTPase ATPase AAA_24 TsaE TMEM141
Other DBs
NCBI-GeneID: 140762387
NCBI-ProteinID: XP_072956249
LinkDB
Position
7:join(16196148..16196186,16196267..16196344,16196430..16196558,16196674..16196722,16196813..16196886,16197226..16197319,16197521..16197621)
AA seq 187 aa
MATVGKANLSAKLVLLGDMGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVSDATVK
FEIWDTAVSAAAAIVVYDITRMESFERAKKWVQELQKQGNTNMVTALAGNKCDLEEKRMV
VTEEACTYADENGLLFMETSAKTAINVNDIFYEIARRLPRAQPAQQPAGMVLADRPAERS
QISTCCS
NT seq 564 nt   +upstreamnt  +downstreamnt
atggcgaccgtaggcaaagctaacctcagcgccaagctcgttttgttgggcgacatggga
gccgggaaatccagcctcgtccttcgcttcgtcaaaggccaattcgtcgaattccaggaa
tccacgatcggagcggctttcttctcgcagacgcttgcggtgagtgatgccacggtaaag
ttcgagatttgggacacggcggtgagtgctgcggcggccatcgtcgtctatgatatcact
aggatggagtcatttgagagagctaagaagtgggtccaggagctacagaaacaaggtaat
acaaacatggtgacagcacttgcaggaaataagtgcgatctggaagagaaaagaatggtt
gtaactgaggaggcatgcacatatgcggacgagaatggtcttctcttcatggaaacctct
gctaagacagcaataaatgtgaacgatatcttctacgaaatagcaagaaggctacctcgt
gcgcagccagctcagcagccagcagggatggttcttgcagacagaccagctgagcggtca
cagatttctacatgctgttcttag

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