Typha angustifolia (narrow-leaf cattail): 140762505
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Entry
140762505 CDS
T11061
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tang03016
]
140762505
Enzymes [BR:
tang01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
140762505
Transfer RNA biogenesis [BR:
tang03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
140762505
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
TYW3
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
TRM5-TYW2_MTfase
Kelch_1
Beta-prop_TYW4
Kelch_HCF
Kelch_2
Kelch_FKB95
TYW2_N_2
Beta-prop_Calicin
NANM
DUF6242_C
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
140762505
NCBI-ProteinID:
XP_072956456
LinkDB
All DBs
Position
7:complement(join(887013..887113,887205..887311,888610..888686,889103..889238,889336..889571,889862..889991,890125..891300,891877..892276,893418..893796,895121..895311,895418..895904))
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AA seq
1139 aa
AA seq
DB search
MEFQKRKEQTLAALSSPSPDKSPKGGVDAPIVPLLEAINRHPYYFTTSSCSGRISILCHT
NPNHNPSPSTQEVSNEDKSNNNNKKTTTKKKAGGGGWVFVSHEPADPDAVVDILFKGHQD
ETLVGGDLVCRFEPLIIAVDCRDAAAAQELVSSAISSGFRESGITSLRRRVMVAIRCSIR
LEVPLGQLGKIIVSPDYIRYLVRIANDKMEVNKKRADGFLRVLQTKGLPKSAEDITHLNE
RHVAQLTDEKLSLELVPKLPEGHLVLVDGNDKDKCADQPADISSVLKNGSVAVKCCDQDN
TLDFGKDEGALSSAGSSGNDKGAEDFNSSLKASNCKDEGETGPVEDTACHALESSGMYRC
CISVALLKITGEPIEKIFLWGHSSCALNSRGEKELLVFGGFGGIGRHARRNYTLMLNPQS
GLLREMDAKGPPSKRLGHSATIVGNNVYVIGGRTGPSQILNDVWVLQTPESRWLQLGCTG
DLFKPRHRHTAVAVGSYIYVFGGLSGEVIYNCLSVLNTETLHWHEVCIEGEWPCARHSHS
SVAYGSQFFMFGGHDGEKALDDLHSFDIRTLQWKKEKTTGKAPSPRFSHSMFIYKTYLGI
IGGCPVKQHYQDLVLLNLHHRVWLHVTVESLSKNLWVRSSTVVIDDDLFVLGGGASCYAF
GTKFNQPMKINLQFLESVHDFSSDEDNKPLGECNKVNHSTSSKYNKNLQGNTESYNSIPV
IDMSAGGDRHYTDAKQLVLQLEKKYAKVAKDILKKFGWLDLTRKVVPNQDGCFIKLPINT
TFKVLYLDEQLNSKTKFGDLDQFHQLGVLFEKEIAVEDVPCCTALKILLSCGGSLLNDDL
CCKKKPSKSPRIMMRESISLLLKTKGMPLQLLEQLPTRWEHLGDMVVLPKSSFKDALWDS
VREELWPIVAKSLGAQRLARQGRILPSGTRDSTLELLVGNNGWVTHQENGILYSLDATKC
MFSSGNRSEKLRMARLDCTNEIIVDLFAGIGYFVLPFLVKANAKLVYACEWNSHALEALE
HNINANFVADRCVILKGDNRVIAPKGVADRVCLGLLPSSECSWVTAVRALRVGGGILHVH
GNVNDSEESSWIDYVVRSISGISESEGLLWDVSVQHLERVKWYGPHIRHLVADVRCKQL
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggagttccagaagcggaaggagcagactctggccgccttgtcgtcgccttcgccggac
aagtctccaaaaggcggcgtggacgcgcccatcgtgccactcctcgaggccatcaaccgc
cacccctattacttcaccaccagctcctgctccggccgcatctccatcctctgccacacc
aaccccaaccataaccctagcccctccacccaagaagtttccaacgaagacaaaagcaat
aacaacaacaagaagacgacgacgaagaagaaagccgggggaggcggatgggtcttcgtc
tcccacgaacccgccgacccggacgccgtcgtcgatatcctcttcaagggccaccaagat
gaaaccttggttggaggagatctcgtttgcagattcgagcccctgatcatagccgttgat
tgccgtgatgctgccgcggcgcaggaacttgtctcgtctgccatctcaagcgggtttaga
gagtcgggtataacaagtttacgaaggcgcgttatggttgccatacgatgttctatacgg
ttagaggtgccgctaggacaacttggtaaaattatagtttcacctgattatattcgctac
ctagtgagaattgccaatgataaaatggaggtgaacaaaaagagggcagatggatttctt
cgtgttttgcaaacgaagggtctcccaaaatcagcagaggacataactcatttgaatgag
agacatgtggctcagcttactgatgaaaaactttctttggagcttgtaccgaagcttcct
gagggacacctagtattggtagatggaaatgataaagataagtgtgctgaccagccagcc
gacatttcatcagtgttaaagaatggaagtgtcgctgttaagtgttgtgaccaagataat
accttagacttcggcaaagatgaaggtgctctttcatctgctggatcttctggaaatgac
aaaggtgctgaggatttcaatagttcactaaaagcatcaaactgtaaagatgaaggggaa
actggacctgtagaggatactgcgtgtcatgctttagagtcatcaggaatgtataggtgc
tgtatttctgttgccttattgaagattactggtgagccaattgagaagatatttctttgg
ggtcactcttcttgtgcattgaacagcaggggagagaaggaactgttagtttttggtggt
tttggaggcataggacggcatgcacgaaggaactatactctgatgcttaatcctcaatct
ggcttattaagagaaatggatgctaagggaccaccttcgaagcgcttgggccattcagca
acaattgtggggaacaatgtttatgttattggaggaagaactggtccatcacaaattctt
aatgatgtttgggttctacagactcctgaaagtagatggttgcagttaggatgcactgga
gatttgttcaaacctaggcaccgacatactgctgttgctgtaggttcgtatatatatgtg
tttggtggacttagtggtgaagttatctataattgcttgagtgtcctgaatactgaaact
ttacattggcatgaggtttgcattgaaggagaatggccatgtgctcgtcattcacattct
tccgtggcctatgggtcacaattttttatgtttggtggtcatgatggtgagaaggcactt
gatgaccttcacagttttgatatcagaacattacagtggaaaaaggagaagacaactggg
aaagctccttctcctagattttcacattcaatgttcatttataaaacttatcttggaata
ataggtggttgtcctgttaaacaacattaccaagatttggttctgctgaacctgcatcat
cgtgtctggttgcatgtcactgtcgaatctctaagtaaaaatctctgggttcgtagctca
actgttgtcattgatgatgacctttttgttcttggtggtggggcatcatgttatgcattt
gggacaaaatttaatcagccaatgaaaattaatctgcagtttttggagtctgtacatgac
ttttcatctgatgaggataataagccacttggagaatgtaataaggtaaaccacagtaca
agctcaaaatacaataagaatttacagggaaacactgagagttataactcaattcctgtg
attgacatgtctgctggtggagataggcactatacagatgctaaacagcttgtcttacaa
cttgagaaaaagtatgctaaagtagcaaaggatattttgaaaaagtttggatggttggat
ctcactaggaaagttgtaccaaaccaagatggttgttttatcaagttaccaattaataca
acctttaaagtcttgtatctggatgagcaactcaactcgaaaactaaatttggtgatttg
gatcaatttcatcagcttggagtgttgtttgaaaaagaaattgcagtagaggatgttcct
tgttgcacagcattgaaaattttgttgtcatgtggtggttcattactaaatgatgatttg
tgctgcaagaaaaaaccctctaaatctcctcgaatcatgatgagagaatcgatcagtctt
ttgctgaaaacaaaggggatgcctcttcaactattggagcaactgcctacaaggtgggag
catcttggtgatatggttgttcttccaaagtcatcttttaaggatgccttgtgggactct
gtcagggaggaactttggcctatagttgcaaaatcacttggtgctcagcgtcttgctcgc
caaggtagaatcttaccatctgggacaagagatagcaccttagaacttcttgttggcaat
aatggctgggttacccatcaggaaaatggaattctctattcacttgatgctacaaaatgc
atgttttcttcaggaaaccgttcagagaagcttcgcatggcccgcctagattgcaccaat
gagattattgttgatttatttgctggtattggatattttgtgctcccgtttcttgttaag
gctaatgcaaaactagtttatgcttgcgagtggaactcccatgccttagaggctcttgag
cataatataaatgccaattttgtggcagatcggtgtgttatactcaaaggagataatcgt
gttattgcacccaaaggagttgctgatcgtgtttgccttggtctcctaccttcaagtgaa
tgtagctgggttactgctgttagagcattaagggtgggagggggcatattgcatgtacat
ggcaatgtcaatgattcagaagagtcatcatggatagattacgttgtaagatccatcagt
ggcatatcagaatctgaaggcttattgtgggatgtttcagtacaacacttggagcgtgta
aagtggtatggacctcacattcgtcacctagttgctgatgtgaggtgcaagcaattataa
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