Typha angustifolia (narrow-leaf cattail): 140762732
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Entry
140762732 CDS
T11061
Name
(RefSeq) vacuolar-sorting protein BRO1
KO
K12200
programmed cell death 6-interacting protein
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03250
Viral life cycle - HIV-1
tang03272
Virion - Hepatitis viruses
tang04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
140762732
03272 Virion - Hepatitis viruses
140762732
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140762732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140762732
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tang04147
]
140762732
Membrane trafficking [BR:
tang04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
140762732
Exosome [BR:
tang04147
]
Exosomal proteins
Proteins found in most exosomes
140762732
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
zf-C4H2
iSirtuin
Trimer_CC
UPF0449
Motif
Other DBs
NCBI-GeneID:
140762732
NCBI-ProteinID:
XP_072956759
LinkDB
All DBs
Position
7:complement(join(14508100..14508603,14508769..14508872,14510390..14510438,14510951..14511091,14511736..14511804,14511989..14512078,14512397..14513347,14514081..14514746))
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AA seq
857 aa
AA seq
DB search
MSSPATSVNVMLAVHEKKTNPVDLYRPLRLYISSTFSERDAQNADDDLAAVRQMRSDLEN
SSSSSPDSRRDLLISYSRALALIEPRFPISPDRGHVSSLAFTWYDAFKPSKKATQNSIHL
ERAAVLFNLGAVYSQIALAADRTAEKGLKQACNAFQSAAGSFAFLRENVAGKAAAGGATV
DVSPESAAMLEKLMLAQAQECFFEKVIGDGKPPGLCSKVARQVGLYYEEAYAALNAAPLN
QHFDKTWVSHVQLKAAQFYGEACYRCALELHEKEEIAEEIARLKIGISALADAKKTSKGV
AAPLLDAVSRLEANMNRNLERAVKENDRVYLMRIPAASSLSALPGASLVKPTPMAEVLDA
SKERLFSGLIPDGSMKALSKYTEMVDDIIRTQAEKLQQGSEITRVKLKEMDLPDSILSLE
GNFSMPLELKEDVEAVQISGGPVGLESELQQLRDLRRVNQELLVQTEELLQKEASEDTQF
RTQFGTRWTRPQSSTLTKNLQDRLNRFAANLKQAADSDGRIERAVKDNYALMAILDHRPI
ESALPSLARPIMSLDGNEDAIVGALKQSLRQLEALGAQRAGLEDMLKEMKRKDDILPKLM
AGTGSQDDLFKKEIKKYDQICEDIAHNIEAQEQLLLQIQAQNDEFAAIFNLEDYKVAREK
SYKQIAAAIAKYREIKDNINEGLKFYVTLQDAINNVRQQCSDFVMTRNIQCREMIEEVQR
QIAGFNFSSDGKSGYKYPSSSQPNPQRTASPQLDQQSPPLPSQHQPPYSHPTGEPRPAYS
QPYPPYPAPQQPPYHVPGSQYQQQQRPPSHEYGQPAYPGWRGPYYNTPQQQPGQHPQPPY
TIPGHYPPHQGGYYRPQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgccggctacgtcggtgaacgtgatgctggccgtacacgagaagaagacgaac
cccgtcgacctctaccgccccctccgcctctacatctcctctaccttctctgagcgcgat
gcccagaacgccgatgacgacctcgctgccgttcgacagatgcgctccgacctcgagaac
tcctcctcttcctcccccgactcccgccgtgacctactcatttcctactcccgcgccctc
gccctcatcgagccccgcttccccatctctcccgaccgcggccacgtcagctccctggcc
ttcacctggtacgacgccttcaagccctctaagaaggcgacgcagaactcgatccacctc
gagagggccgccgtgctcttcaacctcggggccgtgtactctcagatcgcgctcgcggcg
gatcggacggcggagaagggcctcaagcaggcgtgcaacgccttccagagcgcggcgggg
tcgttcgcttttctgagggagaatgtcgccgggaaggcggcggcgggcggcgcgacggtg
gacgtttcacccgagtctgcggcaatgttggagaagctgatgctcgcgcaggcgcaggag
tgcttttttgagaaggttatcggggatggaaagccgccagggttgtgctccaaggtcgca
aggcaggttggtttatattatgaagaagcttatgcggccctgaatgctgctccacttaac
caacattttgataagacatgggtatcacacgtccagttaaaggctgctcagttttatgga
gaggcttgctataggtgtgcattggaacttcatgagaaggaagagattgcagaggagata
gctcgactgaagattgggattagtgctttagccgatgcaaagaaaacttccaagggagtt
gctgcacctcttcttgacgctgtctccaggctggaggctaacatgaatcgtaacctggag
agggctgtaaaggagaatgatcgagtctatctcatgcggattcctgcagctagctccttg
tcagctctgccaggagcatccttagttaagcccactcctatggctgaagttttagatgcc
agcaaggaaagattgttctcaggcctcatcccagatggcagcatgaaagctctctccaag
tatactgaaatggttgatgacatcatccggacccaagcagagaagctgcaacaaggaagt
gagatcacgagggttaaactgaaggagatggatctgccagattctatcctatcattggaa
ggtaatttcagtatgcccttggaacttaaagaggatgtggaggcagtacagatcagcggg
gggcccgtgggcctagagtctgagttacaacagctcagggatttgaggagggtcaatcaa
gagctgctggtccagactgaagagctactgcagaaagaagccagtgaggatactcaattc
aggactcaatttggcacacggtggacaagaccacaatcgagcacgttgaccaagaacttg
caggatcggctgaacagatttgcggcaaatctgaagcaagctgcagatagtgatggccgg
attgagcgagcggtgaaagacaattatgctctcatggcaatccttgaccacagaccaata
gaatctgcccttccaagtcttgcaaggcctattatgtctttggatggaaacgaggatgct
atagttggagccctcaagcagagcttgaggcaattggaggctctaggtgcacaacgtgcc
ggtctagaagacatgctaaaagagatgaagagaaaggatgatatactaccaaagttgatg
gcggggactggatcacaggatgatctctttaagaaggaaattaaaaagtatgaccaaatc
tgtgaagatattgcgcacaatattgaggcacaggagcagttgttactgcaaatacaggca
caaaatgatgagttcgctgctatctttaatctagaggactacaaagttgctcgtgagaaa
agttataagcaaatagctgctgccatagcaaaatatcgagaaatcaaggacaatatcaat
gagggattgaagttttacgtaacgctacaggatgcaataaataatgtaaggcagcaatgc
agtgactttgtaatgacccgaaatattcaatgtcgtgagatgattgaagaagtgcagagg
cagatagctggtttcaacttttcatctgatgggaaatcaggctacaagtacccttcttcc
agtcaacccaatccacagaggactgcttctccacagctggatcagcagagccctccactt
ccatctcaacatcagccaccttattcacatccaacaggagagccaagacctgcatattct
cagccatatcctccttaccctgctcctcaacagcctccttaccatgttccaggtagtcaa
tatcagcaacagcaacgaccaccaagccatgaatatggccaaccagcttatcctggatgg
cgtggaccgtactacaacacacctcaacaacagccagggcagcatcctcagccgccttac
accatccctgggcattacccccctcaccagggtggttactacagacctcaatga
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