Typha angustifolia (narrow-leaf cattail): 140762901
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Entry
140762901 CDS
T11061
Name
(RefSeq) auxin response factor 18-like
KO
K14486
auxin response factor
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140762901
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
140762901
NCBI-ProteinID:
XP_072956981
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All DBs
Position
7:join(13958165..13959283,13959778..13960658,13961120..13961189)
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AA seq
689 aa
AA seq
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MITFDELTKGPMKDSDKCLDPQLWHACAGGMVQMPAVHSKVYYFPQGHAEHAHGTVDFES
SSQIPAFILCRVTGVKFMADPESDEVFTKIRLVPVRSNEPDYADDDEIGLGCNGPEVEKP
ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGEVWKFRHIYR
GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTQNGELCVGIRRAKRGFGVGPESPPGWNP
PTGNCLSAYGKFSVLLREEENKLMRTSGTVNCGGNMRSRGRLRAESVAEAASLAAKGQPF
EVVYYPRASTPEFCVKAAAMRAAMRIQWCPGMRFKMAFETEDSSRISWFMGTISSVQVAD
PIGWPNSPWRLLQVTWDEPDLLQNVKRVNPWLVELVSNMPAIHIAPFSPPRKKLRIAPHP
DFPLDCQLPTPTYHGNTIGPYFVNSTPAGIQGARHAQFGISISDLHLNKLQSSLLHTGFH
QLDHVTPPSRNSTGLLISNSPVHNDISCLLTIGTPSEGTKTLDNGKVPQLVLFGKPILTE
QQISLSNSWDTLSPGVTGNNSSDGNPEKLANISDCSGSAINQNGPTENSSFEGSQASELG
LGTGHCKVFMESENVGRTLDLSVFGSYEELYGRLADMFGVEKAELASHVLYQDAAGSVKH
TGNEPFSEFMKSARRLTILTDTGSNNLER
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgatcacattcgatgaattgaccaagggaccgatgaaggactcagataagtgcctagat
ccccagctctggcatgcctgtgctggtggaatggttcagatgccggctgtgcactccaag
gtctactacttccctcagggtcatgcagaacatgctcacggaacggtcgactttgagagc
tcctcccagatcccggctttcatcctttgcagggtgactggtgtaaaattcatggctgat
ccggagagcgacgaagttttcaccaagatccggttggttccagtgaggtccaacgaacca
gactatgctgatgatgatgaaatcggccttggttgcaacgggccggaggttgagaagccc
gcctcgtttgcaaagacgttgacacagtcagatgccaacaacggtggtggtttctctgtt
cctcgttactgtgctgagaccatcttccctcgtctggactactcggcagaccctcctgtt
cagaccgtgcttgcaaaagatgtgcacggcgaggtttggaagtttaggcatatatatagg
gggactcctcgccggcatcttctcacaactgggtggagcacatttgtgaaccagaagaaa
ctcgtggcaggtgattccatagtttttctgagaacgcaaaacggcgaactctgtgttgga
atcaggcgggctaaacgggggtttggtgtgggtcctgaatccccaccagggtggaatcct
ccgactggaaattgtctatcagcgtatggaaaattctctgtcctcttaagggaggaggag
aataagttgatgaggacaagtggaactgtgaattgtggtgggaatatgaggagcaggggg
aggctgagggccgagtctgttgctgaggcggctagtcttgcagctaaaggacaacctttt
gaggttgtttactaccctagagccagtacacctgaattctgtgtgaaggctgcagcaatg
agagctgcaatgaggatccagtggtgcccaggcatgagatttaagatggcctttgaaact
gaggactcctcaagaatcagctggttcatgggaacaatatcttctgttcaggttgctgat
cctattggatggccaaattcaccttggcggcttcttcaggtgacctgggatgaaccagat
ctgttgcagaatgtgaaacgggtgaacccatggctggttgaacttgtttcaaacatgcct
gcaatccatatagcaccattctcaccgccgaggaagaagcttcgcattgccccacaccct
gactttcctcttgattgccagcttccaactccaacatatcatggaaacacaatagggcct
tattttgtcaacagcactcctgcaggcatacagggagccaggcatgctcaatttggtata
tctatatcagatctccacctcaacaaactgcagtcgagtctgttgcatactggatttcat
cagcttgaccacgtaactccgccctcaagaaactctacaggccttctcattagcaattcc
ccagttcacaacgatatctcatgcttgctaaccattggcactccgtctgagggcacaaag
acattagacaatggaaaggtgcctcagttggtactctttggaaagcctatacttacagag
caacagatatcgctcagcaactcctgggacaccctgtccccaggggtcacgggaaataat
tcatcagatgggaatcctgagaagttggcaaatatctcagattgttctggttctgctatt
aatcagaatggtcccacagagaattcatcatttgaaggaagccaggcatctgagcttggg
ttgggaacagggcattgcaaggtatttatggagtcggagaatgttggtcgcacgctcgac
ctctccgtctttggctcatatgaggaattatatgggcggctggcggacatgttcggagtt
gagaaagctgaattggcgagccatgtcctctaccaggatgcagctgggtcagttaaacat
actggcaatgagcctttcagtgagttcatgaaatccgcaagaaggctgactatactaaca
gacacgggcagcaacaacttagagaggtag
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