KEGG   Typha angustifolia (narrow-leaf cattail): 140762903
Entry
140762903         CDS       T11061                                 
Name
(RefSeq) CLIP-associated protein
  KO
K16578  CLIP-associating protein 1/2
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tang03036]
    140762903
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tang04812]
    140762903
Chromosome and associated proteins [BR:tang03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     140762903
Cytoskeleton proteins [BR:tang04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Cytoplasmic linker proteins (CLIPs)
     CLIP-associating proteins
      140762903
SSDB
Motif
Pfam: CLASP_N CEP104-like_TOG HEAT_EF3_N XMAP215_CLASP_TOG HEAT_EZ HEAT TOR1L1_N Vac14_Fab1_bd HEAT_2 MMS19_N Adaptin_N UTP20 HEAT_DAAF5 HEAT_Maestro TTI1 Tti2 INTS1_R4 MMS19_C V-ATPase_H_N Arm Dopey_N
Other DBs
NCBI-GeneID: 140762903
NCBI-ProteinID: XP_072956983
LinkDB
Position
7:complement(join(12885177..12885335,12885770..12885871,12888174..12888242,12888356..12888424,12888503..12888577,12888667..12888771,12890995..12891096,12891395..12893202,12893394..12893754,12893836..12893934,12894489..12894606,12894682..12894767,12894863..12894931,12895005..12895079,12896507..12896604,12897621..12897782,12898212..12898377,12898560..12898628,12900603..12900665,12900769..12900924,12901658..12901990))
AA seq 1447 aa
MEEALEMARAKDTKERMAGVERLHELLEATRKGLSSAEVTSLVDCCMDLLKDNNFRVAQG
GLQALSSAAVLAGEHFKLHFNGLVPAVVERLGDGKQPVRDAARQLLITLMEVSSPTIIVE
RAGSYAWTHKSWRVREEFARTVAAAVGLFASTELPLQRVLLPPVLQLLNDSNQSVREAAT
SCIEEMYKHVGPQFHEELQRHHLPSSMMKEITARLERIEPKVRPSDGFGVQCVSKEVKSF
NTNQKRSSPRAKSTPRESSLFGGDTDVTEKPVDPIKVYSEKELIREIEKIASTLVPEKDW
SLRIAAMQRVEALVFGGATDYPSFPMLLKQLVPPLSTQLSDRRSSIVKQACHLLNMLSKE
LLGDFEACAEIFIPILFKLVVITVLVIAESADNCIKTMLRNCKVARVLSRIADAAKNDRS
AILRARCCEYALLILEYWADAPEIQRSADLYEDFIRCCVADAMSEVRAIARTCYRMFTKT
WPERSRRLFLSFDPVIQRIINDEDGGMHKRYASPSLRDKGMQLSRAPSHASATNVPGYGT
SAIVAMDKSATVATEASLSSSSLLLSQSKTRGKSSERSLESVLNSSKQKVSAIESLLKGV
STLDKQNFSIARSTSLDLGVDPPSSRDPPFPLAAPASNHLSLQSSASVDSTMANISRGSI
RNGGMLDVTTSQLQASKDHSRSSYLNHLSSESLSALSIPYMRRSSERFQEESSTEENTDI
RSTRRFPNMQIDKHFLEMSYKDTGYRDAHNNYVPNFQRPLLRKQVTTRASASGRNSFDDS
QILGSEMSSYVDTPASLNDALSEGLSPSSDWVARVSAFNCLRTLLQQGPKGVQEITQNLE
KVMKLFFRHLDDPHHKVAQAALSTLAEIIPACKKPFESYIERILPHVFSRLIDPKELVRQ
PCVTTLDIVGKTYSIDTLLPALLRSLDEQRSPKAKLAVIEFANKSFNKHAIISDGYSNSG
FLKLWLSKLAPLVNGKNSKLKDASIAGIISVYSHFDSTAVLNFILSLSVEEQNLLRRALK
QYTPRIEVDLVNFLQSKKERQRLKSFYDQTDVGTSSEEGYIGLSKKGHHFGQYSAGSLDG
ESGRKWSSMQESIMLDASAGQAISDVAQEHINQNLETRSETDILVAKSRESKIQANPVVE
NIGSWANNLEKADGSVERESSISTPRLDISKLVISDGHKAVGLTHVSESIQNSDPTNEKP
SSVKNSPHIENGPSIPQLLHLICNGNDDSSSLDKHEALQQLAKASTVNDRSIWTKYFNQI
LTAVLEVLDDSDSSTRELALSLIVEMLINQKDAMEESIEIVIEKLLHVTRDVVPKVSNEA
HQCLSIVLAQYDPFRCLAVVVPLLVSDDEKTLVVCINCLTKLVGRLSQEELMTQLPTFLP
ALFEAFGNQSPDVRKTVVFCLVDIYIMLGKAFLPYLEGLSSTQLRLVTIYANRISQARSG
APIDANH
NT seq 4344 nt   +upstreamnt  +downstreamnt
atggaggaggcattggagatggcgcgggcgaaggacaccaaggagaggatggccggtgtg
gagcggctgcacgagctcctcgaggcgacgaggaaggggctctcgtcggctgaggtcacc
tcacttgtcgattgctgcatggatcttctcaaggacaacaatttccgggtagcgcagggt
ggattgcaggctctctcgtcggctgctgtgctcgccggggaacatttcaagctccatttc
aatgggctcgttccggccgtcgtggagcggctcggggatgggaagcagccagttagggat
gcggcaaggcagcttttgatcactctcatggaggtttcttcgccaacaatcatagttgaa
agagctggaagttatgcgtggactcacaaaagctggagagtacgagaagaatttgcccgt
acagttgcagcagctgttggtctttttgcatctaccgagcttcctcttcagcgagttcta
cttccgcctgttttgcagttattgaatgattctaaccagagtgtcagagaagctgctaca
tcatgtattgaggagatgtacaaacatgtggggcctcagtttcatgaagaattgcagcgt
catcatcttccttcatctatgatgaaagagataactgctagattagaaaggatagagcca
aaggttcgtccatctgatgggtttggggttcagtgtgtttccaaagaagtaaaatctttc
aacactaaccagaaaagaagcagtccgagggccaagagcaccccaagggaaagctcactg
tttggaggggacactgatgttactgaaaagccagtggacccaattaaagtgtactcagag
aaggaattaattagagaaattgagaagattgcatccacccttgtgccagaaaaagattgg
tcactccgcattgctgctatgcaaagagttgaagctcttgtttttggaggggctactgat
tatccatcatttcccatgctcttaaagcagcttgttcctcctctatccactcaactatct
gatcgacgatccagcattgtaaaacaggcttgccatcttctaaacatgttatcgaaggaa
cttctgggagactttgaggcttgtgcagaaatatttattccgattctatttaagcttgtt
gtgataactgtccttgtgattgctgaatctgcagacaattgcataaaaactatgttgcgg
aactgcaaggttgcacgtgttctttctcggatagctgatgctgcaaaaaatgaccgaagt
gcaattcttcgtgctaggtgttgtgaatatgcgcttttaattttagagtactgggcagat
gcccccgaaatacaacgttctgctgatctctatgaagattttataaggtgctgtgtggca
gatgcaatgagtgaggtgcgtgcaattgcaagaacatgctacaggatgtttacaaaaact
tggccagaacgctcacgccgtctgtttttgtcgtttgatcctgttatacagaggataata
aatgatgaagatgggggaatgcacaaaagatatgcttctccatcgctacgtgataaaggc
atgcagctttcacgtgctccatcacatgcttctgctacaaatgttcctggatatggtact
tcggctattgttgcaatggacaagagtgcaactgttgctacggaagcatctctttcttca
agcagtcttctcttatcacagtctaaaacacgtggtaaaagttcagaacgaagcttggag
agtgtgcttaattctagcaaacagaaggtttcggccattgaaagtttattgaagggtgta
agcacattggacaaacagaatttttcaattgcacgctcaacaagcttggatctaggagtt
gatcctccatcttctcgggatccaccttttcctcttgctgctcctgcctcaaatcatcta
tctttacagagttcagcatcagtggattcaactatggctaacatttcaagaggtagtatt
agaaatggtggtatgttagatgtcacgacttctcagctccaggcttcaaaagatcattca
agatcatcttatttgaatcatctgtcatctgaatctctatcagctttgtcaattccttat
atgagaagatcttctgaaaggttccaagaggaaagtagcactgaagagaatactgatatc
agatcaactaggcggtttcccaacatgcagattgataaacatttcttggagatgtcatac
aaggatactggctacagagatgcacataataactatgttccaaattttcagagacctctt
ctcagaaagcaagtgacaacaagggcttctgcaagtggtagaaatagttttgatgatagc
caaatcttggggagtgaaatgtctagctatgttgatactccagcatctttaaatgatgca
ctttctgagggtctaagtcctagttcagactgggtagccagggtttcagcttttaactgt
cttcggactttattgcaacagggcccaaaaggtgtgcaagaaatcactcagaaccttgag
aaggtcatgaaattgtttttccgtcacttggatgatcctcaccataaagttgctcaggct
gctctttccacacttgcagagattattccagcctgtaagaagccatttgaaagctatatt
gaaagaatcttacctcatgtcttttcaaggctaattgatccaaaggaattggtcagacaa
ccttgtgtaacaacgttggatattgttggtaagacatacagtattgatactttgctacct
gctcttctgcgttcgctagatgaacagaggtctccaaaggcaaaattagctgttattgag
tttgcaaataaatccttcaacaagcatgcaataatttctgatggttatagtaatagtggt
tttcttaagctatggctttctaagttggcacctttagtaaatggtaagaactcaaagctg
aaagatgcttcaattgccggcatcatatcagtctattctcattttgattcaacagcagtc
ctgaattttattcttagtttgtcggtcgaagagcagaatttattgagacgggcactcaag
caatatactcctcgtattgaggtcgatctagtgaacttcttgcagagtaagaaggaacgc
caacgtctcaaatccttttatgaccagacagatgttggaacttcctctgaggaaggttac
attggcttatcaaagaaagggcaccattttggtcagtattcagcaggttcccttgatggc
gaaagtgggaggaagtggagttccatgcaagaatctatcatgcttgatgcttctgctggt
caagcaatctctgatgtggcgcaggagcatattaaccaaaacttggaaactcgcagtgaa
acagatattcttgttgctaaaagcagggaatcaaagattcaagcaaatcctgtggtggaa
aatattggttcttgggcaaataaccttgaaaaggcagatggcagtgtggaacgggagagt
tctatctctactccacgtttagatatcagcaaactggtcatttctgacgggcataaggct
gttgggttgactcatgttagtgaaagcattcaaaattcagatcccacaaatgagaaacct
agttctgtcaagaacagtccccatattgagaatggacctagcataccccaacttcttcat
ctgatatgtaacggcaatgatgatagttcaagtttagacaagcatgaggcattacagcag
ttggctaaagcttctacagttaacgatagatccatttggaccaagtacttcaatcaaatt
ctgacagctgtccttgaggtattggatgattctgattcgtccacaagggagcttgctctt
tctttaatagttgaaatgctcatcaatcagaaagatgctatggaagaatcaattgagatt
gttattgaaaaattgctccatgtgaccagggatgtggtcccaaaggtttcaaatgaggcg
caccaatgtttaagtattgtgttggctcagtatgatccctttagatgtcttgcagttgtt
gtacctttgctggtcagcgacgatgaaaagacacttgttgtctgtatcaactgtttgact
aagcttgttgggcgactttcacaggaggagctgatgactcaattacctacatttttacct
gcactttttgaggcttttggcaaccagagcccagatgttcggaagactgtcgtcttttgc
ctagtggatatctacatcatgcttggcaaagcattcttaccatatttggaggggctcagt
agcacgcagctgcgattagtaactatctatgcaaaccgcatttcacaagcgagatctggt
gctccaattgatgctaaccattga

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