KEGG   Typha angustifolia (narrow-leaf cattail): 140762905
Entry
140762905         CDS       T11061                                 
Name
(RefSeq) chaperonin CPN60-1, mitochondrial-like
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    140762905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140762905
   03110 Chaperones and folding catalysts [BR:tang03110]
    140762905
   03029 Mitochondrial biogenesis [BR:tang03029]
    140762905
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tang04147]
    140762905
Enzymes [BR:tang01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     140762905
Messenger RNA biogenesis [BR:tang03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     140762905
Chaperones and folding catalysts [BR:tang03110]
 Heat shock proteins
  HSP60 / Chaperonin
   140762905
Mitochondrial biogenesis [BR:tang03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    140762905
Exosome [BR:tang04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   140762905
  Exosomal proteins of other body fluids (saliva and urine)
   140762905
  Exosomal proteins of breast cancer cells
   140762905
  Exosomal proteins of colorectal cancer cells
   140762905
  Exosomal proteins of bladder cancer cells
   140762905
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 140762905
NCBI-ProteinID: XP_072956984
LinkDB
Position
7:complement(join(12875196..12875301,12875675..12875753,12875847..12875952,12876041..12876144,12876217..12876316,12877371..12877466,12877575..12877652,12877953..12878021,12878104..12878184,12878270..12878359,12878481..12878567,12878656..12878760,12879496..12879591,12879757..12879932,12880479..12880638,12882001..12882132,12882591..12882615,12882748..12882785))
AA seq 575 aa
MYRAAASLASKARVAGSSSRQVGSRLGWSRNYAAKDIRFGVEARALMLKGVEELADAVKV
TMGPKGRNVVLEQSWGAPKVTKDGVTVAKSIEFKDKVKNMGASLVKQVANATNDVAGDGT
TCATILTKAIFAEGCKSVAAGMNPMDLRRGITMAVDAVVTNLKSRTRMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITISDGNTLYNELEVVEGMKLDRGYISPYFITNQK
NQKCELEDPLILIHEKKISNLNAVVKVLELALKQQKPLIIVAEDVDSDALATLILNKLRA
GIKVCAIKAPGFGENRKAYLQDLAILTGGELITEELGMNLDKVEPHMFGACKKVTISKDD
TVILDGAGDKKVLEERCDQLRSAIETSTSDYDKEKIQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELENLQTANFDQKIGVQIIQNALKT
PVHTIATNAGVEGAVVVGKLLEQENTDLGYDAAKGEFVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAVVVELPKEDKDVPPMGGGMGGMGY
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgtatcgtgctgccgctagcctcgcctccaaagcccgggttgccgggagcagcagtaga
caggtaggaagtaggctaggttggagcagaaactatgctgccaaggacataaggtttggc
gttgaagctcgtgcattgatgcttaagggtgttgaggagttagctgatgctgtgaaagtg
actatggggcctaagggccgtaatgtagttctagagcaaagctggggcgcacctaaagtt
acaaaagatggagtgactgttgcaaagagcattgagtttaaagacaaggtgaaaaacatg
ggtgcaagcctagtgaagcaggttgctaatgccactaatgatgttgctggtgatggtacg
acatgtgccacaattctcacaaaagcaatatttgctgaaggatgcaagtctgtggcagct
ggaatgaatccaatggatctaagacgtggcataacaatggctgttgatgctgtagtgacc
aacttaaagagcaggacaaggatgatcagcacatccgaggagatagcacaggttggaacc
atatctgctaatggagaaagagaaattggtgagcttattgctaaggctatggagaaagtt
ggtaaagagggagtgataaccatctcagatggtaatactctgtacaatgagctggaagtt
gtggagggaatgaaacttgatcggggctatatatctccctacttcatcactaaccagaaa
aaccagaaatgtgagctagaggatcctctcattttgatacatgaaaagaaaatatcaaac
cttaatgcagtggtaaaagtattagaattagccttgaagcaacaaaagcctctaattatt
gttgctgaagatgtagacagtgatgcattggcaacactcattctcaataaacttcgtgca
ggaattaaggtctgtgccatcaaagctcctggttttggggagaacaggaaagcctatttg
caagaccttgctatactaactgggggtgaactcataactgaggaacttggcatgaacctt
gataaggttgaacctcatatgtttggtgcgtgcaagaaggtgacaatatcaaaggatgac
actgttattcttgatggggctggagataagaaggtccttgaggaaagatgtgaccagctg
agatctgcaattgaaacaagcacctctgactatgacaaagagaaaatacaggaaaggttg
gcgaagctttctggaggtgttgctgtcttaaagattggaggtgcaagcgaagctgaagtt
ggtgagaagaaggatagagtgactgatgctttaaatgctactaaagctgctgttgaagag
ggtattgtaccaggtggtggtgttgcacttctttatgcttcaaaggagttggagaatttg
cagactgccaactttgatcagaagattggtgtccaaataattcaaaatgctctgaagacc
ccagtacacaccattgctacaaatgcaggagtcgaaggggcggtggttgttggcaagctt
ttggagcaggagaatactgatcttggctatgatgcagcaaaaggtgaatttgtcgacatg
gtcaaggcaggcatcattgatccactgaaagttattagaactgcattggtggatgctgca
agtgtttcatcattgatgactactaccgaggctgttgttgtggaactccctaaagaagac
aaggatgtccctccaatgggcggtggtatgggaggaatgggttattaa

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