Typha angustifolia (narrow-leaf cattail): 140763009
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Entry
140763009 CDS
T11061
Name
(RefSeq) tubulin alpha-3 chain
KO
K07374
tubulin alpha
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04145
Phagosome
tang04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
140763009
09142 Cell motility
04814 Motor proteins
140763009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tang03019
]
140763009
03036 Chromosome and associated proteins [BR:
tang03036
]
140763009
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tang04812
]
140763009
04147 Exosome [BR:
tang04147
]
140763009
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140763009
Chromosome and associated proteins [BR:
tang03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
140763009
Cytoskeleton proteins [BR:
tang04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
140763009
Exosome [BR:
tang04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140763009
Exosomal proteins of other body fluids (saliva and urine)
140763009
Exosomal proteins of colorectal cancer cells
140763009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
140763009
NCBI-ProteinID:
XP_072957131
LinkDB
All DBs
Position
7:join(2052714..2052826,2053455..2053669,2053753..2053952,2054484..2054992,2055088..2055403)
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AA seq
450 aa
AA seq
DB search
MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDTSVGVAHDAFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT
SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGADDDGDEGEDY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagagagatcataagcatacacatcgggcaggccggtatccaggtggggaatgcgtgc
tgggagttgtactgcctcgagcatggcatccaacccgatgggatcatgcccagtgatacc
tcggttggggttgcacatgatgcattcaacactttctttagcgagactggtgctggcaag
catgtgccaagggccatctttgtggatttggaacccaccgtcattgatgaagtgaggacc
ggcacttatcgccagctcttccacccagagcagctcatctctgggaaggaagatgctgcg
aacaactttgcgcgaggccactacacagttgggaaggagattgtagatctgtgccttgat
cgtgtgcggaaattggcagacaattgcactggcttgcaaggctttttagtcttcaatgct
gttggtggtggaacaggatctggtttgggctctttgcttctggaacgtttgtctgtggac
tacgggaagaaatctaagcttggcttcaccatctatccttccccacaggtttctacagcg
gttgtggagccatataatagtgtcctttctacccattccttgctagaacacactgatgtt
gctgttcttctggacaatgaggccatttacgacatttgcaggagatctcttgatattgag
aggccaacctataccaacttgaaccggttgatatctcagatcatttcctcactgaccacc
tctctgaggttcgatggagctattaatgttgatgttacagaattccagacgaaccttgta
ccatatcctcgaattcatttcatgctctcctcatatgcccctgttatctctgctgagaag
gcataccatgagcagctatcagtgcctgagatcactaatgctgtttttgagccttcaagc
atgatggcaaagtgtgacccaaggcatggcaagtatatggcctgttgtttgatgtaccgt
ggtgatgttgtccccaaggatgttaatgctgccgttgcaaccatcaagactaagaggacc
gtccagtttgttgactggtgccccactggttttaagtgcggtatcaactatcagccacca
actgtggtgcctggaggtgatcttgcaaaggtgcagcgtgctgtgtgcatgatcagcaac
aacactgctgttgctgaggtgttctcacgtattgaccacaaatttgatcttatgtatgcg
aagcgggcatttgtgcattggtatgtaggtgaagggatggaagaaggtgaattctctgaa
gcgcgagaagatttggctgcgcttgagaaggattacgaggaagtcggagcagagggtgca
gatgatgatggggatgagggagaagactattga
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