Typha angustifolia (narrow-leaf cattail): 140763114
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Entry
140763114 CDS
T11061
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related-like isoform X1
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140763114
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140763114
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140763114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_16
zf-RING_UBOX
Prok-RING_4
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING_10
zf_RING_Vps8
Prok-RING_1
zf-RING_Vps41
RINGv
FANCL_C
zf-Nse
Host_attach
Motif
Other DBs
NCBI-GeneID:
140763114
NCBI-ProteinID:
XP_072957268
LinkDB
All DBs
Position
7:complement(join(15466890..15466928,15467835..15467943,15468274..15468395,15468480..15468524,15468597..15468676,15469026..15469269,15469763..15469937,15470034..15470083))
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AA seq
287 aa
AA seq
DB search
MSSICSQFEILVVLLGRVFSDCLADIMGMESDTTGKHKVVVHYVNSPVSCVVEENFGGYF
DDLDDVALAEVIQDQECVYQSFQRNVESGRARASNADSRSNRSNHNQRRSLGERSSSRAP
SSDPQLAADEAFARDLQELENQMAGTSIGDISRMEAGMVIQGANSTSSSTSNSGLNSAST
SAQVAREDDIDPDSMSYEELQQLGEAIGTQSRGLSEELIQLLPSTTYKTGLFSKKEKTEC
VICRMVLKNRDKLITLPCQHQYHKTCITEWLKISKACPICTEEVFGS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaatttgttctcagtttgaaatcctggttgttctcttggggagggttttctcc
gattgcttagccgacatcatggggatggagtctgacacgacgggaaaacacaaagtggtt
gttcattatgtaaattctcctgtttcttgcgttgttgaagaaaatttcggaggatatttc
gatgatcttgatgatgttgctcttgcagaggttattcaagatcaggaatgcgtctaccag
tcattccagagaaatgttgagagtggtagggctagagcttcaaatgcagattctagatct
aatagatctaatcataaccaaaggcgaagcttaggagaaagaagctcatcaagagctcca
agttctgatccacaactagctgcagatgaagctttcgctagagatcttcaagagttagag
aatcagatggctggtacctccattggtgatattagcagaatggaagctggaatggttatt
caaggagccaactccacgtcatcttcgacatctaacagtggactcaattctgcaagcaca
tctgctcaggttgcaagggaagatgatattgacccagatagtatgagctatgaggaattg
caacaattaggtgaagccataggtactcagagcagagggttgtcagaagagctgatacaa
ttgttaccatctacaacctacaaaacagggttattttcgaagaaagaaaaaactgaatgt
gtgatttgtcgtatggttcttaagaacagagataaattgatcacattgccctgccaacat
caataccataaaacttgtatcactgaatggttaaagataagcaaggcatgccccatttgc
actgaagaggtatttggctcttaa
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