KEGG   Typha angustifolia (narrow-leaf cattail): 140763198
Entry
140763198         CDS       T11061                                 
Name
(RefSeq) DNA repair protein RAD5B-like
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tang03400]
    140763198
DNA repair and recombination proteins [BR:tang03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    140763198
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C UBA_RAD5A HIRAN zf-C3HC4 zf-C3HC4_3 zf-RING_2 zf-RING_UBOX DEAD zf-C3HC4_2 zf-RING_5 ResIII zf-C3HC4_4 Prok-RING_4 RING_XB3-XBAT31 UBA GIP1_N zf-RING_4 Baculo_IE-1 CUE
Other DBs
NCBI-GeneID: 140763198
NCBI-ProteinID: XP_072957383
LinkDB
Position
7:join(11922109..11923215,11923336..11923469,11923645..11923780,11923925..11923978,11924316..11924465,11924595..11924746,11924841..11924925,11925249..11925440,11925760..11925903,11926000..11926155,11926342..11926409,11926640..11926762,11926922..11927021,11927530..11927642,11927753..11928326,11928443..11928514,11928597..11928695,11928791..11928913)
AA seq 1193 aa
MPATFEVPEMAFLLAEEIKNIRLVLGSEIPDRDIIKALSTCGNNPNRAINVLLDSPGLLD
ASDPVKKEMSSRDLKGNDTVSVSGSIDSVKMEKPEVGSLNNDILLKTEVKKEEPDMGLYK
DVMLFTEVKVKKEESEVLIEKSNVLMSGIKVEREEPHMDPEKNTILLAEVKVEKEESDIH
LGNDGVLMPEIKVKNGEPDMAEGIVIRKSEGQEEWEEYVRNNCLPKEEKPDMGSKKDENL
KRNHMPMDTEECSDESFPELTKAHFSPYLNPRPISAIRPSMVADRRLQVVGTAEIGEFPE
EPDWFLVGKTYMKGLSTCRGRRYLDAGEIVHLSFPSSETKKWYGGMRVSAKAAAAVSEIV
RFSTKRSGEIGRLPTEWTRCLIPLVNSTKVKVQAQCVFPQVELRLLQDIVLYVSFYIHSS
IFTEVDKSSWKLVSTSQLDSTVHPLPTLFKLLKIKPFKKADFTPEELDSRKRSLNLNDDD
EESTPVVGLAKRRKGGKTYPEQDKDEQAISESSLNKLVGAADMYDLEELEPPSTLVCDLR
PYQKQALFWMSELEKGIDFEQAGKTIHPCWNAYKIVDRRASAVYVNVFSGEATTEFPTAT
QMARGGILADAMGLGKTVMTIALLLANPKGEASNDPDIDYKVPKVPRTKTSSVRGGTLIV
CPMALLGQWKDELEAHSKPGALSVFVHYGCDKTNDLKVIAEHHVVLTTYGVLSSAYKADS
EKESIFHKIEWYRVVLDEAHTIKSSKSRVAQSAFALSSHCRWCLTGTPLQNNLEDLYSLL
CFLHVEPWCNWAWWQKLIQKPYENGDERGLRLVKAILRPLMLRRTKDTKDKEGRPILVLP
PASVQIIECVQSEAERDFYEALFKKSKVKFDQFVAQGKVLHNYASILELLLRLRQCCNHP
FLVMSRGDTQEYADLNKLARHFLDGSQNNPQGSQSFPTRAYVEEVVEGIRQGEVTECPIC
LESASDDPVLTPCAHRMCRECLLSSWRSPSGGPCPICRNPLSRADLITCPTDSRFQVDVE
KNWKESSKVTKLIKCLESIQKRREKSIVFSQWTAFLDLLEIPLKRKNIGFLRFDGKLSQK
RRECVLKEFSQSDDNLVMLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIG
QKRQVQVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEVRSARIEELKMLFR
NT seq 3582 nt   +upstreamnt  +downstreamnt
atgccggcgaccttcgaggtcccggagatggcgttcctcctcgccgaagagatcaagaac
atccgattggttcttggatccgaaatccccgatcgagacatcatcaaagccctttctaca
tgcggaaacaacccgaatcgtgcgatcaacgtcctcctcgactcgcccgggttgctcgac
gcatccgatccggtgaagaaagagatgagttctcgtgatctgaaagggaacgataccgta
agtgtttccggttccattgatagtgttaagatggaaaaacccgaggtaggttctttaaat
aatgatattttgttaaaaaccgaagttaaaaaggaggaacctgacatgggtttgtataaa
gatgttatgttgtttactgaggtcaaagtgaaaaaggaagaaagtgaggtgcttattgag
aaaagcaacgttttgatgtctgggatcaaagttgaaagggaggaacctcatatggatcct
gagaaaaatactattttgcttgcggaggtaaaagttgaaaaggaagaaagtgatattcat
cttggcaatgatggtgttttaatgcctgagatcaaagttaaaaacggggaacctgatatg
gctgaaggaattgttataaggaagagcgagggtcaagaagaatgggaagagtatgtcaga
aataattgcttacctaaagaagagaaacctgatatgggttctaaaaaagatgagaatttg
aagagaaatcatatgccgatggacacagaagaatgctctgacgagagtttccctgaactg
acgaaggcccatttctccccataccttaatcctcgccccatttctgctattaggcctagt
atggttgcagaccggagacttcaagtcgtcggtacagctgagattggagagttcccggag
gagcctgattggtttcttgtggggaagacctacatgaaggggctatcgacgtgccgtgga
aggaggtaccttgatgccggtgagattgttcatttgtcctttccatcttctgaaacaaag
aaatggtacggtggtatgcgggtgagcgcaaaggcagcagctgcggtgtctgagatagtt
cgcttttcaacaaagcgtagtggagagattgggaggcttcccactgagtggactagatgc
cttattccacttgtgaattctaccaaggttaaggttcaagcacaatgtgtatttcctcaa
gtagaactcagattattgcaggatattgtgctatatgtaagcttttacatccatagttca
atcttcacagaggtagacaaatcatcatggaaactcgtaagtacttcacaattggattct
actgttcatcctctcccaacgctatttaaattactgaagataaaaccatttaaaaaggct
gatttcactccagaggagcttgattccagaaagcgctcactaaacctaaatgatgatgat
gaggaatctaccccagttgttggtcttgcaaagcggcgaaagggtggcaaaacttatcct
gaacaagacaaggatgaacaagctatctcagaatcttctctaaataagctcgttggtgct
gcagatatgtatgacttggaggaactagagccacccagcacacttgtttgtgatctacga
ccctaccaaaaacaggcactcttctggatgtctgaactggagaaggggattgattttgag
caagcaggaaaaactattcatccatgttggaatgcctataaaattgttgacaggagagct
tctgcagtatatgtgaatgttttctcaggtgaagctacaacagagtttccaactgctaca
cagatggcaagaggcggaatactagcagatgcaatgggtcttgggaaaactgtcatgaca
attgctttgttacttgcaaatccgaagggagaagcctcaaatgacccagatatagattat
aaagtaccaaaggtcccgagaaccaaaacctccagtgtaagaggaggcactcttattgta
tgtccaatggcattattgggccagtggaaggatgaactcgaagctcattcaaagcctgga
gcactttctgtctttgtacactatggttgtgacaaaactaatgatctcaaagtaatagct
gaacatcatgtggtcttaacaacatatggagtcttatcatcagcttataaagctgattca
gagaaagaaagcatctttcacaaaatagaatggtatagagtggtgctagatgaagcgcat
actatcaaatcttcaaaaagccgagttgctcaatcagcctttgcattaagttcacattgt
aggtggtgcctaacaggcactcctctgcagaataatttggaggatctctacagtcttctt
tgcttcttacatgttgagccatggtgcaattgggcttggtggcaaaaattgattcagaaa
ccttacgaaaatggtgacgaaagagggttaaggttggttaaagctatcctaaggccgttg
atgctgaggagaacaaaggacacaaaagataaagaaggaaggcccatccttgttctccct
ccagccagtgttcaaattattgaatgtgtacaatctgaagctgaacgtgatttctatgaa
gctctatttaagaaatcgaaggttaaatttgatcagtttgttgcacaaggtaaagttctt
cataactatgcctccatactggagctcctccttagattaaggcagtgctgcaaccacccc
tttcttgttatgagtcgaggggacacccaagagtatgcagacctgaataaacttgcccgt
cactttcttgatggatcacagaataatcctcaaggatcacagagttttcctacgcgagcc
tatgtcgaagaggttgtcgaaggcatccgtcagggtgaggtgaccgagtgcccgatctgc
cttgaatcagcatctgatgacccagttctcacaccttgtgctcaccgaatgtgccgagaa
tgcctcctttctagttggcggtctccatcaggagggccctgcccaatttgccggaatccc
ctgagccgagctgacctcatcacctgcccgactgatagccgtttccaggttgatgtcgag
aagaactggaaggagtcatccaaggtcaccaagcttattaaatgcctggagagcattcag
aagcgacgggagaagagcattgtcttcagccagtggactgcattcttggatctactagag
attcctctaaagaggaaaaatattgggttcttgagatttgatgggaagttaagtcagaaa
cggagggagtgtgttctgaaagagttcagtcagagtgacgacaatttggtgatgttaatg
tcattgaaggcaggaggtgtgggattgaatctgactgcagcttcaaatgtctttctgatg
gatccatggtggaatcctgcagttgaggagcaagcaatcatgaggattcatcggatcggg
cagaaacgtcaagtccaagttaggcgattcatagtcaaggacacagtagaggagagaatg
cagcaagttcaagcacgcaagcagaggatgatcgctggcgccctcaccgacgaggaagtt
cggagtgctcgaatcgaggagctcaagatgctatttcgatga

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