Typha angustifolia (narrow-leaf cattail): 140763274
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Entry
140763274 CDS
T11061
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140763274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tang03019
]
140763274
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
140763274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
140763274
NCBI-ProteinID:
XP_072957487
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Position
7:join(13304724..13304945,13309264..13310361)
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AA seq
439 aa
AA seq
DB search
MDSDQGKLFIGGISWETTEDKLRDYFGSYGEVLQAVIMKDKLTARPRGFGFIVFADPAVL
DRVLQDRHTIDDRMVEAKRALSREEQQTAKAMNPIVGRSSGSSGGNFRTKKIFVGGLPPT
LTEEGFRQYFENYGNVTDVVIMYDQSTQRPRGFGFISFDSEDAVDHVLQKTFHDIIGKVV
EVKRALPREANQMSGGGSYHTNTGSTVNTSNYDGRVDSNRYMQAQAAGGGYPTYGTPGYG
YGTNNGIGYGGYNFGGYNGSNPGYGGPAGAYGNPNVPSTGYTSAPPGAVRSPWSNQAPSA
YGSGSYGSNPAYGASATWNSPAAATGQSPNASTGYGNQSYEYGGYGGVEGSFGSQGGYGA
IGGRGGSASNPAAEQGELGAGSGYMGGGYGDGRGNSGYPDAWRSDPSQVGGYGTSQGSGP
PGGSASYGGGFSGAQTRQT
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggactcggatcaggggaagttatttatcgggggaatatcttgggaaactacggaggat
aagctccgggattacttcggaagctatggggaggtattgcaggcggttatcatgaaggat
aagctcacggcaaggccgaggggcttcggattcatcgtcttcgcggatcccgccgtcctc
gatcgggtcctccaggaccgccacaccatcgacgacaggatggtggaagcaaaaagggct
ctgtcaagagaggaacaacagactgcgaaggctatgaaccccattgttgggagaagctct
ggtagtagtggtggtaactttaggacaaaaaagatatttgtaggtgggcttccacccact
ttaactgaagagggattccgtcagtactttgagaactacggaaacgtaactgatgttgtt
atcatgtatgaccaaagcactcagcgtccccgaggatttggatttatttcttttgattcg
gaggatgcagttgatcatgtgctacagaagaccttccatgatattattggcaaagttgtg
gaggttaagcgtgccctcccaagagaagcaaaccaaatgagcggtggtggatcctaccac
actaatactggttctactgtcaatacaagcaattatgatggtagagttgattccaatagg
tatatgcaggcacaggcagctggtggtggttatccaacttatggtacacctgggtatgga
tatggtacaaacaatggcattggttatggaggctataattttgggggctataatggttct
aatcctggttatggtggacctgctggagcttatggaaatccaaatgttccttctacaggt
tatacaagtgctcctccaggtgcagttagaagtccttggagtaatcaagctccgtctgct
tatggctctggaagctacggttcaaatccagcttatggagcatctgctacatggaattcc
cctgctgcagctactggtcagtctcccaatgcaagcactggatatgggaatcagagttat
gagtatggagggtatggtggagtagaaggatcgtttggtagtcagggtggatatggggcc
attggaggccgaggcggtagtgctagcaatcctgctgctgagcaaggagaactcggtgct
ggttctggctacatgggtggtggctatggtgatgggagagggaattctggttatccagat
gcatggaggtctgatccttctcaggttggaggttatggaactagtcaaggaagtggacct
cctggtgggtcagctagctatggtggaggcttcagtggtgcacaaaccaggcagacttag
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