KEGG   Typha angustifolia (narrow-leaf cattail): 140763294
Entry
140763294         CDS       T11061                                 
Name
(RefSeq) protein argonaute MEL1-like
  KO
K11593  eukaryotic translation initiation factor 2C
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140763294
   03036 Chromosome and associated proteins [BR:tang03036]
    140763294
Messenger RNA biogenesis [BR:tang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     140763294
Chromosome and associated proteins [BR:tang03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    140763294
   RNA interference (RNAi) pathway
    RITS (RNA-induced transcriptional silencing) complex
     140763294
   microRNA pathway
    RISC loading complex
     140763294
SSDB
Motif
Pfam: Piwi ArgoN PAZ ArgoL1 ArgoL2 ArgoMid
Other DBs
NCBI-GeneID: 140763294
NCBI-ProteinID: XP_072957522
LinkDB
Position
7:join(2475218..2475736,2476371..2476576,2476657..2476806,2476927..2477060,2477345..2477454,2477570..2477676,2477777..2477915,2478007..2478123,2478261..2478368,2478449..2478520,2479386..2479505,2479583..2479754,2479876..2479997,2480085..2480222,2480698..2480840,2480913..2480975,2481054..2481117,2481225..2481360,2481428..2481501,2481602..2481696,2481828..2481859,2481954..2482129)
AA seq 998 aa
MSTRGGGSGSGGRRGGGRGRGRRGGRGGDFVVEPAPAELFYAQRGGGRRSGRGDKGGRGG
DGSGHGVATLPPSSSVPQQPPTPPPAVAQLGGEMEKMALKESTVGEASASAATPSTMAVE
AAEESAPVAPPPASSKAIRHPLRPGFGTVGKKCVVRANHFLVEVADKDLCHYDVAITPES
TSRARNRLVISELVKLHKQSTLANRTPVYDGRKSLYTAGALPFTSKNFVVKLTDTDKSGK
ARAEKEFKVTIKLVGRADLQHLQQFLHGRQLDVPQETIQVLDVVLRESPSTTYVTVSRSF
FSPLFGNKRDIGNGVECWRGYYQSLRPTQMGLSLNLDIAATSFYKAGPLVGFVQEYLNIR
DSARPLSDTDRIKLKRALRGVRVEATHRRDICIRYKITGISSAPMNQLMFSLDDQGTRVS
VVQYFKQRYNYSLKYVSWPCLQAGTDSRPTYLPIEVCNLLEGQRYARKLNERQVTGILRA
TCQRPSDREKSILEMVHGNNYNNDNYAKEFGIKVINQLVSVDARVLPPPKLKYHDAGREK
VCNPAVGQWNMINKKMVNGGTVHCWACLSFSRMRQDEVLRFCCDLVNMCNNIGMVFNPKP
CIDNQVAHPDSVESALREVQNKSMEGLARQGITGRQLQLLIVILPDASGFYGRIKKVCET
ELGIVTQCCLPKNLAKGDNQYLENVALKINVKVGGRNTVLEGALHNGIPFVTDLPTIIFG
ADVTHPPPGEDSLSSIAAVVASMDWPEVTKYRGLVSAQEHRQEIIKDLFSVVQDPQKGTI
YGGMIRELLLAFYRVTKHKPHRIIFYRDGVSEGQFNQVLLNEMDAIRKACASIQENYLPP
VTFVVVQKRHHTRLFPEVHGRRDLTDRSGNILPGTVVDTKICHPSEFDFYLCSHAGIQGT
SRPTHYHVLFDENHFTADGLQMLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYMEG
DNSEGTSSAGGGKTRDTSAEVRQLPRIKDNVKDVMFYC
NT seq 2997 nt   +upstreamnt  +downstreamnt
atgtctactcgcggaggtggtagcggcagcggaggccgccgcggaggcggacgtggacgc
ggccggcgaggtggtcgcggcggtgatttcgtagtggagcctgctccggccgaactgttc
tatgcgcagcgcggcggtggacgccgatctggacgtggcgataagggaggtagaggtggc
gatgggagtgggcacggcgtggctacgctgccgccgtcttcatccgttccccaacagccg
cctactccccctccggcggtggcgcaactaggaggggagatggagaagatggcgttaaag
gagtcgacggttggagaagcttctgcaagcgccgcgacaccgtcaacgatggcggtggag
gcggctgaggaatccgctccggtggctcctccgccggcgtcgagcaaagcaataaggcat
ccgctgcgtcctggatttgggaccgtggggaagaagtgcgtggttagggctaaccatttc
ctcgtcgaggtggcggataaggatctttgccattatgacgtggcaataaccccagaatcc
acctcaagggcgagaaatagattggttatttctgagcttgttaagttgcataagcaatcg
acattagctaaccggactcctgtctatgatgggaggaaaagcttgtataccgctggagct
ctgccattcacatcaaagaatttcgtggttaagctgactgatacagacaagtctggcaaa
gctagggcggagaaggaattcaaggtaacaattaaacttgttggaagggctgacttacag
cacctccaacagttccttcatggaaggcaactggatgtgccacaggagactatccaagtt
cttgatgtggtgttaagggagtccccctcaacaacgtatgtcactgtgtcgagatcattc
ttttctccactgttcgggaacaagagggacattgggaatggcgtggagtgctggaggggt
tattaccagagtctacgacccacacagatggggttgtcactaaatcttgatattgctgca
acatctttttacaaggctgggcctcttgtaggttttgtacaagaatatcttaacattcga
gacagtgcaaggcccttgtcagacacagaccgtattaagttaaagagagctttgagagga
gtcagagttgaagctactcatcggagggacatatgcatacgttataagattacaggcata
tcatctgctccaatgaatcaactgatgttctctcttgatgatcagggaactagggtatct
gttgtccagtactttaaacagcgatataactattctctgaagtatgtttcatggccctgt
cttcaagctgggactgatagtagaccaacttacttacccatagaggtttgcaacctcctt
gaaggacagagatatgctcgaaaactgaatgagcgacaagtaacaggtatattgagggca
acttgtcagaggccatcagacagggaaaagagtatcttggagatggtacatggtaacaat
tacaacaatgataactatgcgaaggagtttggaattaaggttataaaccaacttgtttct
gttgatgctcgtgtgcttccccctccaaagttgaaatatcacgatgccgggagagagaaa
gtatgcaacccagctgtcggtcagtggaacatgatcaataagaaaatggtcaatggagga
actgtgcattgctgggcatgcttgagtttttcacgaatgcgtcaagatgaagttctacga
ttttgctgtgatcttgtcaatatgtgcaacaacattgggatggtattcaatccaaagcca
tgtatcgacaatcaagtagcccatcctgatagtgttgagtctgctttgcgagaggttcaa
aacaagtctatggaaggactagctcgccagggcataacagggaggcaactccaattgctg
atagtaattttgcctgatgctagcggcttctacggaagaataaaaaaagtttgtgaaact
gagcttgggatagtgacacagtgctgcttgcctaagaaccttgctaaaggagataatcag
tatcttgaaaatgttgctctgaaaattaacgtaaaggttggagggcgtaatacagtgctt
gaaggtgccctacataatggaatcccttttgtaacagacttgccaactattatctttgga
gctgatgttactcatccacctccaggagaggattcattgtcctcaattgctgcggttgtt
gcttcaatggattggccagaggttaccaaatatagaggtttagtctctgcccaagaacat
aggcaggaaattataaaggatctgttttcagttgtccaagatccgcagaaggggactatc
tacgggggcatgattagagaattgttgctagctttttatagagtgaccaaacataagccc
cacaggatcatattctacagggatggcgtaagcgaaggccaatttaaccaggtgttgttg
aatgaaatggatgctattcggaaggcttgtgcttctatacaggagaattaccttcctcca
gtaacatttgtggtggttcagaagcggcaccacactcgcctgtttccagaagttcatggg
agacgggatttaactgatagaagtggaaatatattaccaggtaccgtggttgacacaaag
atctgccatcccagtgaatttgatttctatctttgcagccatgctggtatacaggggact
agccgtccaactcactaccatgttctattcgatgaaaaccattttactgctgatggtttg
cagatgctaactaataatctatgttacacctatgcacggtgcacgcggtctgtatcaata
gttccgcctgcatattatgcacatttagctgcatttcgtgcacgctactatatggaaggt
gataactctgagggaacgtcttctgccggcgggggtaagactcgcgatacctctgctgag
gtgcggcagctccctcgcatcaaggataatgtgaaggacgtaatgttttactgctga

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