Typha angustifolia (narrow-leaf cattail): 140763317
Help
Entry
140763317 CDS
T11061
Name
(RefSeq) probable galacturonosyltransferase 3 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang00520
Amino sugar and nucleotide sugar metabolism
tang01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
140763317
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tang01003
]
140763317
Enzymes [BR:
tang01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
140763317
Glycosyltransferases [BR:
tang01003
]
Polysaccharide
Structural polysaccharide
140763317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
140763317
NCBI-ProteinID:
XP_072957546
LinkDB
All DBs
Position
7:join(16265342..16265404,16265507..16265608,16266381..16266460,16267121..16267181,16268715..16268789,16268861..16269195,16269284..16270229,16271028..16271303)
Genome browser
AA seq
645 aa
AA seq
DB search
MASACRNFSGSSFLLLAISLQDDAFASVFFVLSLCSEAHCEEVHLIWCLDRRSFTLWILA
CSVRPEILDTIPSKIALGAATSRKDVNGFRQMPNCPGCGDGKGREELSEPGLESQEDVIS
RKKLQRLKLRQVRRKERALKLIQMSENAEIQMREAAIERSNNFNSSIRPQYSIWRREHDN
FRADSTLKLMNDQIIMAKVYASIARSRKLPDLADHLMKHIKESEGVIKEANSDSELQQGA
LQCAKAMGQALSMAKDKLYDCVVIARKLRAMVQSAEETITAQKKKSMFLMQYASKTIPKP
LHCLPLLLTTDYFLQGHSSKALADKRKLEDPSFYHYAIFSDNVLATSVVVNSTIVNAKQP
EKHVFHIVTDRLNFAAMKMWFIVHSPPNTTIDVQNVDDFKWLNASYCPVLSQTDSANLKD
YYFAVNHPSTVSIGDEHLKYRNPKYLSLLNHLRFYMPELYPKLDKILFLDDDIVVQRDLT
PLWSINLKGMVNGAVETCGKTFHRFHTYLNFSDPIISDNFDPEGCAWAFGMNLFDLKEWK
KKNITSIYHYWQEQNKDRKLWKLGSLPAGLLAFYNLTYALDRHWHVLALGYKPKIRLSEI
EKAAVIHYNGNYKPWLDLAIMEYKGYWSKYVKFDSPYFHTCNIHL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgcttgtagaaacttctctggaagcagctttcttctactcgccatctcgttg
caggacgatgcatttgcctcggttttctttgttctttctctatgttctgaagcgcattgc
gaggaggtgcacttgatttggtgtctggatcggcgatcgtttactctctggatccttgca
tgctcagtcaggccagagatattagatacaattccatcaaagatagcacttggtgctgcg
acaagtcgaaaagatgtcaacggttttagacaaatgccaaattgtccgggatgtggagac
gggaagggtagggaagaattatcggaacccggacttgaatcacaagaagatgtaattagt
cgcaagaagcttcagagactgaaactgcgccaagtgaggagaaaagagcgagctttgaag
cttatccaaatgtccgagaatgctgaaattcagatgagagaagctgcaattgaacggtca
aataatttcaacagtagcattaggccacaatatagcatatggagaagagaacatgataat
tttcgtgcagattcaactctgaaactcatgaatgatcagatcataatggctaaagtatat
gctagtattgctcgttccagaaaattgcctgatcttgctgatcacctgatgaaacacatt
aaagaaagtgaaggtgtcatcaaggaagcaaactctgattctgaactacaacaaggcgct
cttcaatgtgcaaaagcaatgggccaagctttatccatggcaaaagacaagctatatgat
tgtgttgtaattgcaagaaaattacgtgccatggttcaatctgccgaagaaactataact
gcacaaaagaagaaaagcatgtttttgatgcagtatgcctcaaagacgatccctaagcca
ctgcactgtcttcctttgctgcttacaactgattacttcttgcaaggtcatagtagtaaa
gcattagcagacaagagaaagcttgaagatccttccttttaccactatgcaattttctct
gataacgtacttgcaacgtcagttgtggtcaactctactatagtaaatgccaagcagcca
gagaaacatgtatttcatatcgtgacagacagactgaactttgcagctatgaagatgtgg
ttcattgtccattccccaccaaatactactattgatgtgcagaatgttgatgactttaag
tggcttaatgcttcttattgtccagttcttagtcaaacagattctgctaatctcaaggac
tactactttgcagtaaatcatccatctacagtttcaattggtgatgagcatctgaagtat
aggaaccccaaatacctgtctttgcttaatcatctcagattctacatgccagaactgtat
ccaaagctggataagatactttttcttgatgatgatattgttgttcaacgggatttgact
ccactgtggtctataaacttgaaagggatggtgaatggagctgtagagacttgtgggaag
acttttcatcggttccatacatatctcaacttctcagacccaattatctctgataatttt
gatccagaaggttgtgcatgggcatttgggatgaacctctttgacttgaaggaatggaag
aagaaaaatataactagtatataccattattggcaagaacagaacaaagatcggaagctc
tggaagcttgggtcgctgcctgcaggtttgcttgcattttacaacctgacttatgcactt
gatcgccactggcatgtcctggccctgggttacaagcctaaaatcagactttctgagatt
gaaaaggctgcggtcattcactacaatggaaactataagccttggctggacttggctatc
atggaatacaagggatattggtcgaaatatgttaagtttgatagcccatacttccatact
tgcaatattcacctatga
DBGET
integrated database retrieval system
