Typha angustifolia (narrow-leaf cattail): 140763327
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Entry
140763327 CDS
T11061
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 21-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tang01002
]
140763327
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140763327
Enzymes [BR:
tang01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
140763327
Peptidases and inhibitors [BR:
tang01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
140763327
Ubiquitin system [BR:
tang04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
140763327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
140763327
NCBI-ProteinID:
XP_072957561
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All DBs
Position
7:join(17909418..17909456,17909656..17909733,17909829..17909949,17910060..17910167,17910571..17910743,17910850..17911185,17911266..17911385,17911474..17911882,17912126..17912520)
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AA seq
592 aa
AA seq
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MEEDHLLPSTSQSGDFHLGSGESRSLWQPPASSKQRYRVGASLENLGNTCFLNVILQCIT
HTVPLVQKLRSFNHAIPCSGDQEFCTFCALRDHVNEAINKSGSVLIPERFRDNLRKISPD
FEPGQQEDAHEFLRCLLNSLHNCSLDPISNNQLFYLEQDSIVKQVFGGRLRSQLRCVECG
HCSDTYEPFLDLSLEIDDIDTVDDALMSFTKVENIDDPETKFTCNGCQSQVLMEKQLKVD
KAPDVLALQLKRFKNDGLSIYKICKPVEYPSELDLNPFLSSPHEEVPLNYDLYGVVEHRG
SFDFGHYVCVIRSSATEWHKLNDRQVASISENNALNQQAYILFYVKRGLAPWFSSLLDLK
ELSSSPTSVLEHTDREPSTSFGEGEVSCRTETPEKDECSPCTSTSVPGEAARCLVAAYSR
VPDAPRDKDADKIDAGKPLKQPAGESVSDQLVTVVFQSEQLEDEEDNLIPQVQGRSEGSV
GRPAPPAINQDKALKRLLRSVHGSRRSRILDCLAKQDEEQRRPSLNSRCNPNGKRRRQID
CLCPNTDHCAPSKQGAAQPANASTSHLTFCPRSLMFSDDSVPDFEIGSNMTN
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaccacctcctaccatcgacttcgcaatccggtgattttcatctgggaagc
ggcgaaagtcgcagcctttggcagcctcctgcttcgagtaagcagcgatatcgggtggga
gcgtctctcgagaatttggggaacacatgcttcctcaatgtgatccttcaatgcatcact
cacacggttccacttgtgcagaagcttcgttcgttcaatcacgctattccatgttccggt
gaccaggagttctgcactttctgtgctctgcgagatcatgtaaatgaagctattaataag
tcgggttctgtcctaattccagaaagatttagagataatcttagaaaaatttcgcctgat
tttgagcctggacagcaagaggatgctcatgagttcctgcggtgcttgttgaatagtttg
cataattgctctcttgatcccatctccaataaccagcttttttatttggaacaagatagc
attgtcaagcaggtcttcggaggccgtctaagaagtcagctgcgctgtgttgagtgtgga
cactgctcggacacgtatgaacccttcctggacctcagcttggagattgatgacatagac
actgttgatgatgccctaatgtcgtttactaaggtggaaaatattgatgatcctgaaacc
aagtttacctgcaatggctgccagtctcaagtgttgatggaaaagcagcttaaggtggat
aaagcaccagatgttcttgcacttcagctcaagcgatttaagaacgatggcttgtcaatt
tataagatatgtaagcctgtggagtatccatcggagctggatttgaatccatttctcagc
tccccacatgaggaggtgccattaaattatgatctgtacggagttgtagagcaccgtggc
tcatttgattttggccattatgtttgtgtcatccgctcctccgctacagaatggcacaaa
ctgaatgatcgccaggtggcctcgatatccgagaacaatgctttaaatcagcaagcatat
atcctcttctatgttaagcggggtttggctccatggttctcgagtttactagatttaaag
gagttgtcatcttctccaacatctgtgctggagcatacggatagagaaccttctacatct
tttggtgagggtgaggtcagttgtcgtacagaaacaccggagaaagatgagtgcagcccg
tgcactagcaccagtgtcccaggtgaggctgcgagatgcctcgttgcagcttattcaaga
gtacccgatgcccctcgggataaagatgctgacaaaatcgatgcgggcaaacctctaaaa
cagcctgctggggaatctgtttctgatcaactcgtcaccgtggtgttccaatctgagcaa
ctagaagatgaggaggataatttgattccacaagtccaagggagatcagaaggtagtgtg
ggaaggcctgctcctcccgctattaaccaggataaggccttgaaaaggttgctaagaagt
gtccatggttcacgaagaagtcggatcctagattgcctagccaagcaagacgaggagcaa
cgcaggccaagtctaaattcaaggtgcaaccctaatggtaagagaaggcgacaaatagat
tgcctctgccccaacactgatcattgtgctccatcgaagcaaggtgccgcacagcctgca
aatgcaagcacatctcacctaaccttctgccctcgctctctaatgttttcagatgactca
gtaccagattttgagattggctccaatatgaccaactaa
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