KEGG   Typha angustifolia (narrow-leaf cattail): 140763390
Entry
140763390         CDS       T11061                                 
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    140763390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140763390
   03110 Chaperones and folding catalysts [BR:tang03110]
    140763390
   03029 Mitochondrial biogenesis [BR:tang03029]
    140763390
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tang04147]
    140763390
Enzymes [BR:tang01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     140763390
Messenger RNA biogenesis [BR:tang03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     140763390
Chaperones and folding catalysts [BR:tang03110]
 Heat shock proteins
  HSP60 / Chaperonin
   140763390
Mitochondrial biogenesis [BR:tang03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    140763390
Exosome [BR:tang04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   140763390
  Exosomal proteins of other body fluids (saliva and urine)
   140763390
  Exosomal proteins of breast cancer cells
   140763390
  Exosomal proteins of colorectal cancer cells
   140763390
  Exosomal proteins of bladder cancer cells
   140763390
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 140763390
NCBI-ProteinID: XP_072957666
LinkDB
Position
7:complement(join(11239484..11239774,11239848..11240299,11242016..11242322,11242438..11242583,11242732..11242939,11243089..11243210,11243432..11243600,11243747..11243803))
AA seq 583 aa
MAAASGISAASIFRSSPRQEFLGRRASPGQRPNGRRQLVVRATAKDIAFDQSSRSALQAG
VEKLANAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIREVASK
TNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVQGLVEELEKKARPVKG
RGDIKAIASISAGNDDIIGTMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYV
SPQFVTNPEKLLVEFENARVLVTDQKISTIKEIIPLLEKTTQLRAPLLIIAEDITGEALA
TLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAKDLGLLIENTTVEQLGTA
RKITVSQSSTTIIADAATKDEIQARIAQIKKELAETDSVYDSEKLAERIAKLSGGVAVIK
VGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAYVHLSTCVPAIKDKIEDADERL
GADIIQKALVAPAALIAHNAGVEGEVVVEKIKDSEWEMGYNAMTDKYENLVESGVIDPAK
VTRCALQNASSVAGMVLTTQAIVVEKPKPRAPVAGPAEGVLSV
NT seq 1752 nt   +upstreamnt  +downstreamnt
atggccgcagccagtggaatctccgccgcctctatcttccggtcctcccctcgccaggag
tttttgggaaggagagctagtcccgggcagagacccaatggtcgcaggcaattggtggtt
cgtgcgacagcaaaggacattgcttttgaccagagctccaggtctgctctccaggctggt
gtcgagaagctcgcaaatgccgtcggggtaacccttggacctagagggaggaatgttgtt
ttggatgagtttgggaacccgaaagtagtaaacgatggagtcactattgctcgggctatc
gagcttgctgatccaatggagaatgccggtgctgctttgattcgtgaggttgctagtaag
accaatgactcagctggtgatggtactacgactgcatcagttcttgctcgggagatcatt
aagttgggtctcttgagtgttacttctggtgcgaatcccgtctcaattaagaagggaatt
gataaaactgtgcagggtctagtggaagagcttgagaagaaagctagacctgtcaaggga
cgtggtgatatcaaagctattgcctctatctcagctggtaatgatgacatcattggaacc
atgattgctgatgcaattgataaagttggtcctgatggtgttctttcaattgagtcttcc
tcatcatttgagaccactgttgatgttgaagaaggaatggagattgaccgaggttatgtc
tccccacagtttgttacaaatcctgagaagttacttgttgagtttgagaatgctcgagtt
cttgtgactgatcaaaagatctcaactataaaggaaataattcctttgttggagaagacc
acacaattgagagctcctcttctcattattgctgaggatataacaggcgaggctttggca
actcttgtcgttaacaagctgcggggtattctcaatgttgctgcaatcaaagctcctggt
tttggtgagcgaaggaaggctcttcttcaggatattgccattgtgacaggtgctgaattc
caagcaaaggatcttggcttattgatagagaatacaacagttgagcagcttggcacagct
aggaaaattacggtctcacaatcttccacgaccataattgcagacgcagccactaaagat
gagatacaggctagaattgctcagataaagaaggagcttgctgagacggactcagtctat
gattctgagaaattagctgagagaattgcaaaactttctggtggtgtggctgtcatcaag
gttggagctgcaacagagacagagcttgaagaccgcaagctccggattgaggatgccaag
aatgctacttttgcagccatagaggagggaattgtacctggaggtggtgcagcctatgtt
cacctctcaacctgtgttcctgccattaaggacaagatcgaagatgctgatgaacgcctt
ggggctgacatcatacagaaggcactagtggcacctgcagccttgatagcacataatgct
ggagtggaaggagaagtggtggtggagaaaattaaggacagcgagtgggaaatgggttac
aatgcaatgaccgataagtatgagaatttggtggaatccggtgtcattgacccagctaag
gtcacaagatgcgcactacagaatgcttcctcagtggccgggatggtcttgacaacgcag
gctatcgttgtagagaagccaaagccgagggctcccgtagctggaccagcagagggagtt
ctttccgtttga

DBGET integrated database retrieval system