KEGG T11061: 140763718

Typha angustifolia (narrow-leaf cattail): 140763718

Entry

140763718         CDS       T11061

Name

(RefSeq) poly [ADP-ribose] polymerase 1 isoform X1

K24070

poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]

Organism

tang Typha angustifolia (narrow-leaf cattail)

Pathway

tang03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:tang00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    140763718
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tang03032]
    140763718
   03036 Chromosome and associated proteins [BR:tang03036]
    140763718
   03400 DNA repair and recombination proteins [BR:tang03400]
    140763718
Enzymes [BR:tang01000]
2. Transferases
  2.4  Glycosyltransferases
   2.4.2  Pentosyltransferases
    2.4.2.30  NAD+ ADP-ribosyltransferase
     140763718
DNA replication proteins [BR:tang03032]
Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    140763718
Chromosome and associated proteins [BR:tang03036]
Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    140763718
DNA repair and recombination proteins [BR:tang03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     140763718

SSDB

Motif

Pfam:

PARP zf-PARP PARP_reg PADR1_N Zn_ribbon_PADR1 WGR BRCT BRCT_2

Other DBs

NCBI-GeneID:

140763718

NCBI-ProteinID:

XP_072958134

LinkDB

Position

7:complement(join(11946493..11946540,11947178..11947360,11948468..11948605,11948800..11948882,11949637..11949745,11949843..11950034,11952876..11953036,11953154..11953230,11953316..11953428,11953503..11953740,11966251..11966505,11966599..11966662,11966789..11966849,11967038..11967187,11967267..11967462,11969850..11970168,11970284..11970470,11971381..11971561,11971721..11971770,11973810..11973956))

AA seq 983 aa
MATNPPKPWKAEYAKSGRSSCKSCKNAIAKDQLRLGKMVTATQFDGFMPMWNHATCIFKK
GSQIKSFDDVEGIDLLRWDDQQKIRKYIDDGSSTKAVVSNDECAIEVSQTSRATCRRCNQ
KIMKGTVRVSAKPEDQGARGLAWHHVNCFMEMFPSMSFEKLLGWNTLSLQDKETVCAIVK
KDTCKNIPDDLSQQKTSKGAKRKQVRGDENTCKVSKSEGNSSAGRILSKGSDLESSEHVT
SSPSELERKLKEQSDALWNIKDNLKKHVTTAELREMLEANGQDSSGSEYSLRDRCADGMI
FGALGNCPICSGSLHYSGGQYLCHGFVSAWSKCSYSTTEPVRLKGKWKIPEETSNQYLIK
WFKSQKLKRYSRILPLPSPDKPSGSQVKSSNGEGLGNLKVAIAGKSHEVIEELKRKLDVA
GGKFHTKIKKDTNCLVLCGEVDDNDSEARKARRLKLPIVREDYLDQCINKKKILPFDLYK
VETATESSSGIVTVKVKGRSAVHESSGLQDTGHILEDGKSIYNTTLNMSDLSTGINSYYI
LQVIKEDKGSGCYVFRKWGRVGNDKIGGKKLEELSKSDAIHLFKRLFLEKTGNPWEAWEQ
KHNFEKQPGRFFPLDIDYGVKQVPKKKDPTTNKSSLAPQLIELMKLLFDIETYRAAMLEF
EINMSEMPLGKLSKKNIQKGFEALTEIQNLLSNGGHNATIKDSLIVDASNRFFTLIPSIH
PHVIRDEDDFKAKVKMLEALQDIEIASRLVGLDGEDDESLDEKYKKLRCDITPLPHDTED
YKLVEKYLLNTHAPTHKDWTLELEEVFSLEREGEFDMYAPYRNKLQNKMLLWHGSRLTNF
VGILSQGLRIAPPEAPATGYMFGKGVYFADLVSKSAQYCFVDRKDPVGLMLLSEVALGEV
HELKKATYMEKPPKGKQSTKGLGKTVPLESEFVNWKDEVTVPCGKPVPSNIRASELLYNE
YIVYNTAQVKMQFLLKVRFHHKR

NT seq 2952 nt +upstreamnt +downstreamnt
atggcgacgaacccaccgaagccatggaaggcagagtacgccaagtccggtaggtcttct
tgcaagtcttgcaagaacgcaatcgccaaagaccaactccgcctcggcaagatggttacc
gccacccaattcgacggcttcatgcccatgtggaaccatgctacttgcatcttcaagaaa
ggaagccaaataaaatcctttgatgatgttgaaggaatagacttacttagatgggatgac
caacaaaagataaggaagtatattgatgatggatcttctactaaagctgttgtttccaat
gatgaatgtgccattgaagtctctcaaacttctcgtgctacttgtaggcggtgtaaccag
aagattatgaaaggaacagtccgtgtctcagccaaacctgaggaccaaggtgccaggggt
ctagcttggcaccatgtcaattgttttatggagatgttcccatccatgagttttgagaaa
ctcttaggttggaataccttatcacttcaggataaagaaactgtttgtgcaattgttaag
aaggatacttgtaaaaatataccagatgacctttcacagcagaaaacttccaaaggcgct
aaacgtaaacaagttcggggtgatgagaatacatgtaaagttagcaaaagtgaggggaat
agttcggcaggtaggattttaagtaaggggagtgatcttgaatcatctgaacatgtcacc
tctagcccttctgagttggaaagaaaactgaaagagcaaagtgatgcattgtggaacata
aaagacaatcttaaaaaacatgtcacaactgcagagctaagggagatgctggaagctaat
ggacaggattcatcaggatcggaatattctctacgggatcgttgtgctgatgggatgatt
tttggagcattgggtaattgccctatctgttctggttctctccattattctgggggtcag
tacctttgccatggctttgtatctgcatggagtaagtgttcatactccacaactgagccc
gtccgtcttaaggggaagtggaaaatccctgaagaaactagtaaccaatatcttatcaag
tggttcaagtctcaaaagttgaagagatatagtagaattcttcctctgccatctccagat
aaaccttcgggtagtcaagttaagtcatctaatggtgaaggactgggtaatttgaaagtt
gctatagctggaaaatcacatgaagtaattgaggagttgaagaggaaacttgatgttgct
gggggtaaattccataccaagattaaaaaggatactaactgtttggttctctgtggggag
gtggatgataatgattctgaagctaggaaagccaggaggctgaagttacctattgtgagg
gaagattatcttgatcaatgtattaacaagaagaaaattcttccttttgatctgtataaa
gttgaaacagcaacagagtcttcaagtggcatagtcactgttaaagtgaaaggacgaagt
gctgtgcatgagtcatctggtttgcaagacacaggtcatattcttgaggacggaaaaagc
atatacaatacaaccttaaacatgtctgacctctcaactggtataaacagttactatatt
cttcaggtgatcaaagaagataaaggatcaggatgctatgtatttcggaagtggggacga
gttggaaatgacaaaattggtggcaagaagttggaagagttgtcaaagtctgatgccatt
catctatttaaaagattatttcttgaaaagacaggaaacccttgggaagcatgggaacag
aaacataattttgagaaacaaccaggcagatttttcccgcttgacattgattacggtgtc
aagcaagtcccaaaaaagaaagatcctactaccaacaaaagctcacttgctcctcaattg
atagaacttatgaaattgcttttcgatattgaaacttacagggcagctatgttggaattt
gaaattaatatgtctgaaatgcctctcggaaagctaagcaagaagaatatccagaagggg
tttgaagcattaacagaaatacaaaatctattaagtaatggtggacataatgcaaccatt
aaagatagcttgattgttgatgccagtaatcgctttttcactcttatcccttcaattcat
cctcatgtcataagagatgaagatgatttcaaggcaaaagttaaaatgcttgaagctctt
caggacattgaaattgcttctagactagttggtttggatggtgaagatgatgaatccctt
gatgagaagtacaagaaactcagatgtgatattactcctttgcctcatgatactgaggac
tataaattagttgagaagtatctactcaacacccatgctcctacacacaaggattggact
cttgaactggaggaagttttctctcttgaaagagaaggagaatttgatatgtatgcacct
tatagaaataagctccagaacaagatgttattgtggcatggttcaagactgacaaatttt
gttggtattcttagccaaggattgcgaatagcacctccggaggctccagcaacaggctac
atgtttggcaaaggtgtttactttgctgacttggtgagtaagagtgcacaatattgcttc
gtggacagaaaagatccggttggattgatgcttcttagtgaggttgctctcggtgaggtg
catgaactcaagaaagcaacttatatggaaaaaccaccaaaagggaagcagtctaccaaa
ggattgggcaaaactgtgcctctggaatctgagtttgtgaattggaaggatgaagtcact
gtcccttgtggtaaaccagttccatcaaatatccgagcttcagagctactttacaatgaa
tacattgtctataatacagctcaggttaagatgcagttcctgctgaaggtgaggttccat
cacaagaggtga

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