Typha angustifolia (narrow-leaf cattail): 140763943
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Entry
140763943 CDS
T11061
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang00040
Pentose and glucuronate interconversions
tang01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140763943
Enzymes [BR:
tang01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140763943
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Peptidase_C24
Motif
Other DBs
NCBI-GeneID:
140763943
NCBI-ProteinID:
XP_072958433
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All DBs
Position
7:join(12459814..12459923,12460068..12460163,12460671..12460736,12461582..12462224,12462315..12462418,12462525..12462663,12462742..12462963)
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AA seq
459 aa
AA seq
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MAAAAPLRWLPILALGLLVLLAGGLGWIGAEKHSLSRIGGDGAASSRRSLRAADAAMAAA
NGTSPMTTRAEEEAVVGAVDDPDSVASEVHMTINNHTARRALGYLSCGTGNPIDDCWRCD
PSWHRRRKRLADCGIGFGRNAIGGRNGRFYVVTDPNDDDPVNPKPGTLRYAVIQDEPLWI
VFKRDMVITLKQELIMNSFKTIDGRGFNVHIANGACITIQFVTNIIIHGLHIHDCKPTGN
AMVRSSPSHYGFRTIADGDGVSIFGSSHIWVDHCSLSNCADGLIDAIMGSTAITVSNNYF
THHNEVMLLGHSDSYVRDKSMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYA
IGGSANPTINSQANRYLAPVNPFAKEVTKRVDTDTSVWKSWNWRSEGDLLLNGAYFTPSG
AGASASYSRASSLGAKSSSMIGSITSGAGVLSCRRGYVC
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcagcgcctctccgatggctcccaatcctggctcttggtctcctcgtactc
ctcgccggtggcctcggctggatcggcgctgagaagcattccttatcgaggattggtgga
gacggagctgcgagctcgaggaggagcttaagagcggcggacgcggcaatggcggcggcg
aatgggacttcgccgatgacgacgagggcagaggaagaagcagtagtgggcgcggtcgac
gatccggactcggtcgcctcggaggtccacatgaccatcaacaaccacacggcacgccgc
gcgctcggctacctgtcatgcgggacgggcaaccccatcgacgactgctggcgctgcgac
cccagctggcaccgccgccgcaagcgcctcgccgactgcggcatcgggttcgggcgcaac
gcaatcggaggccgcaacggccgcttctacgtcgtcactgacccgaacgacgacgacccc
gtgaaccccaagccgggcactctccgctacgccgtcatccaggacgagcccctctggatc
gtgttcaagcgcgacatggtcatcaccctcaagcaagagctcatcatgaacagcttcaag
accatcgacggccgcggcttcaacgtccacatcgccaatggcgcgtgcatcacgatccag
ttcgtgaccaacatcatcatacatggcctccacatccatgactgcaagcccaccgggaat
gccatggtccgcagctccccgtcccattacgggtttcggacgatagccgatggtgatggc
gtttccatctttgggtccagccatatctgggtggatcactgctctctctccaattgcgcc
gatggtctcattgatgccatcatgggctccaccgccattaccgtttccaacaattacttc
acccaccacaatgaggtgatgttattgggtcatagcgattcttacgtaagggacaagtcg
atgcaagtgaccatcgccttcaaccatttcggtgaaggtcttatccagaggatgccaaga
tgcagacatggctatttccatgtggtaaacaacgactacacccactgggagatgtacgcc
atcggcgggagcgcaaatccgaccatcaacagccaggccaatcggtatctcgcgcccgtc
aaccccttcgccaaagaggtgacaaagagggtagacacagacaccagtgtttggaagagc
tggaactggagatcagagggggacctgttattgaatggtgcctattttaccccctctgga
gctggagcctccgcaagttactcaagagcctccagccttggtgccaaatcctcttcaatg
attgggtccatcacttcaggtgctggagtactctcttgccgcagaggttatgtttgctag
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