KEGG   Typha angustifolia (narrow-leaf cattail): 140763957
Entry
140763957         CDS       T11061                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tang03016]
    140763957
Enzymes [BR:tang01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     140763957
Transfer RNA biogenesis [BR:tang03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    140763957
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf-CCCH zf_CCCH_4 DEAD_2
Other DBs
NCBI-GeneID: 140763957
NCBI-ProteinID: XP_072958450
LinkDB
Position
7:complement(join(6165406..6165504,6165592..6165761,6175577..6175697,6176098..6176379,6176481..6176753,6183903..6184156,6184280..6184553,6187026..6187262,6187374..6187490,6189517..6189789))
AA seq 699 aa
MDEVIDAKPDEPHSQAPPNLRPTPEELVARAVAPVKAEYLRPPPVRSNEDEARNGHPDED
DDTKEKKITLSSSNVVKEKKSKRQLKRERKQEQNSVVHICTEVARSGNVDSCPYGGNCRF
NHDLNAYLAQKPADLEGTCPFIALEEPCPYGVTCRFSNTHKNNIPLGSHNIPRKRDEINV
LKKDLQKLLWKNKVSFPKADAQLKILGLKGPNRTKEKSEVDHVEIHQDNLDGSYDLHGNE
KDKMLCSMVEKLECAPTVCVEQDCSDDASVMNGSSLIDESRPLKKTKSQVDENQEIDISS
GASCTEIDLRDTNEPNKPSPDGLSSCKVDLIVKPHPRERKLIDFREKLYLAPLTTVGNLP
FRRVCKILGADITCGEMAMCTNLLQGQASEWALLRRHSSEDIFGVQICGAYPDTVARTVE
LVSSECSVDFIDINMGCPIDIVVNRGAGSSLLTKPMRMKSIIQAASCTTDKPLTVKVRTG
YFEGRNRIDSLVSDIGDWGASALTIHGRSRQQRYSKLADWDYIYQCARKAPENLHVLGNG
DIFSYSDWNRQFANCTELSSCMIARGALIKPWIFTEIKEQRHWDITSGERLNILRDFVHF
GLEHWGCDTKGVETTRHFLLEWLSYTYRYIPVGLLDVVPQRLNWRPPSYFGRNDLETLLA
SDSAADWIRISEMLLGKVPEGFNFAPKHKSNAYDRAENG
NT seq 2100 nt   +upstreamnt  +downstreamnt
atggatgaggtaatcgatgccaagccggacgaaccccattcgcaggctcctcccaacttg
cgcccgactccggaggaacttgtggctcgtgctgtggcgcccgtgaaggccgagtacctt
cgtccgccgcccgtgaggtccaacgaagacgaggcaaggaatggacaccccgacgaggac
gacgacaccaaggagaaaaagatcactctttcttcttcaaatgtcgtcaaggagaagaag
tccaagcgacagctcaaaagagaacgcaagcaggaacaaaattctgtggtacatatttgt
acagaagtagcaagaagcggaaatgtggattcatgcccttatggtggtaattgccgtttc
aaccatgacttgaatgcatatttggctcagaaaccagctgaccttgaaggaacttgtcca
ttcatcgctttggaagagccatgtccttatggagtaacttgccgattttcaaatacacac
aagaataacatccctttgggatctcataatattcctaggaagcgtgatgagatcaatgtt
ttaaaaaaagatcttcagaagcttttgtggaagaataaagttagttttcctaaggcagat
gctcaactcaaaattcttgggcttaagggtcctaacagaacgaaggaaaaatcagaagtt
gaccatgtggaaatccatcaagataatctagatggatcatatgatcttcacggaaatgag
aaagataagatgctctgcagcatggttgagaaactagaatgtgctccaacggtgtgtgta
gaacaggattgttcagatgatgcctctgttatgaatggctcatctttaattgatgagtca
agacctttgaagaagacaaagagtcaagttgatgaaaatcaggaaattgatattagtagc
ggtgcatcttgcactgaaatagatttgagagatactaatgagccaaataagccatcacct
gatggattgagttcatgcaaagttgacctaattgtgaagccacatccacgtgaaagaaag
cttattgatttcagagagaagttatatcttgctccattgacgactgtcggcaatcttcct
ttcagaagggtctgcaaaattttaggtgctgatattacttgcggagagatggctatgtgt
acaaatctcttacaggggcaagcttcagaatgggcattgctgaggcgacattcatcagag
gatatatttggagtgcaaatatgtggggcttatcctgacactgtagctcgtacagttgag
cttgtgagcagtgaatgttcagttgactttattgatatcaatatggggtgcccgattgat
atagttgtcaacaggggtgcagggtcttctttgcttacaaaaccaatgaggatgaagagt
attattcaagcagcatcttgtacaactgacaaacctttaacagttaaggtgcggacaggt
tattttgaaggaagaaaccgtattgattctctggtttcagacattggtgattggggagcc
agtgcactgacaatacatggtagatcacgccagcaacgctatagcaaactggctgattgg
gattatatctaccagtgtgcacggaaggcccctgagaatttgcatgttttaggaaatggt
gatatattttcatactctgactggaacaggcaatttgccaactgcactgagctatctagt
tgcatgattgctcgaggtgctttgattaagccatggatatttactgaaataaaggaacaa
agacattgggacattacttctggcgagaggcttaatattctgagagattttgttcatttt
ggtctagagcattggggctgtgatacaaaaggtgtggagacaacacgtcatttcttgttg
gaatggctaagttacacataccggtacataccagtaggcctactggatgttgttccccaa
cgcttaaattggagaccacctagctactttggtcggaatgatcttgagaccctactggcc
tctgattcagctgccgactggattaggatctctgagatgttgcttggcaaggttccagaa
ggctttaattttgcgccaaaacataaatccaatgcatacgaccgtgcagaaaacggctga

DBGET integrated database retrieval system