Typha angustifolia (narrow-leaf cattail): 140764037
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Entry
140764037 CDS
T11061
Name
(RefSeq) protein RMD5 homolog isoform X1
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140764037
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140764037
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
140764037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
Rtf2
zf-RING_2
zf-C3HC4_4
CTD1
zf-C3HC4
Rota_NSP3
SR_plectin_7
Motif
Other DBs
NCBI-GeneID:
140764037
NCBI-ProteinID:
XP_072958578
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Position
7:join(2816508..2816659,2818117..2819317)
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AA seq
450 aa
AA seq
DB search
MYQKFQPIVAISRGCCVFFYSILLLLPPSSIFTTSLAAISTTPAIHFPRRRSGLKAAQPD
FSQLMELDTIKDGFERIAKRQKLSSTKTQEVINQIEKEVDQAIVKMHTISSDASESPDHT
FILQELRTRLNDMAPVNQLQGCQKELIVALTKYVKLLEKCFNQDISKAYKSMDFGIHIVN
EIIASHFYRDGLFDLGDCFLHESCETDDSSLKVQFQEMHRVLHAMKARNLEPALSWVAKN
SEQILQNGSGLELKLHQLQFMEILKQGGRDEALKYARVHLSPFASVHKAKIQKLMACLLW
AGRLDQSPYTELMANPHWEKLADEVTRQFCSLLGQSYKSPLGVVIAAGIQGLPTLLKLTT
VMTAKNQEWQSMKQLPVPVDLGREFQFHSVFVCPVLREQGGNENPPMLMPCGHVLSKQSI
LKLSKSSTRPFKCPYCPLDSVVSQCRQLHF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaaaaatttcaacctatagtcgctataagtcggggttgctgtgtattcttttat
tccattcttctcctcctccctccgtcgtctatatttaccacctcgcttgccgccatttca
acaactcctgcgattcactttccccgacgaaggtctggcttgaaagctgcgcaaccagat
ttctctcagttaatggagctcgatacaatcaaagatggatttgaacgcattgccaagaga
caaaagctatcatccactaaaactcaagaggtcatcaaccagattgagaaagaggttgat
caggcaattgtgaagatgcacacaatcagtagtgatgcttctgaaagccctgaccataca
ttcattctccaagagctgaggactaggttgaatgatatggctccagtgaatcaacttcaa
ggctgtcagaaggaactgatcgttgcactgaccaagtatgtcaagctcctcgagaagtgc
tttaatcaagatatatccaaggcatataaaagtatggattttggcatccatatagtaaat
gaaattattgccagtcatttctatcgcgatggcctgtttgatcttggagattgcttctta
catgagtcttgtgaaactgatgattcatctttaaaagtccagttccaagagatgcaccga
gtactccatgcaatgaaggctaggaaccttgagcctgctctcagttgggttgccaagaac
agtgaacagatactgcaaaatggttctggccttgagttgaagcttcaccaactgcagttc
atggagatccttaagcaaggaggccgagatgaggctctaaagtatgcaagagtgcacttg
tctccatttgcctctgtgcacaaggccaagatccagaagctaatggcatgtctcctatgg
gccggccggcttgatcagtccccatacaccgagctcatggccaatccacactgggaaaag
ctggcggacgaggtcactcggcagttctgcagccttcttggccagtcctataagagtcca
ctaggggtggtgattgccgcgggtattcaaggacttccaacgctgctgaagctgacgaca
gtgatgactgctaagaatcaggagtggcaatccatgaagcaactccctgttcctgtggac
ctgggaagggagttccaattccattccgtctttgtttgccctgtgctaagggagcaaggg
ggtaatgagaacccaccaatgctgatgccttgtgggcatgtgctatccaagcagtccatt
ctgaagctgtcaaagagcagcacacggccgttcaagtgcccttattgcccattggattca
gtggtgtcacagtgcaggcaacttcatttctaa
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integrated database retrieval system
