KEGG   Typha angustifolia (narrow-leaf cattail): 140764229
Entry
140764229         CDS       T11061                                 
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
  KO
K08775  breast cancer 2 susceptibility protein
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03440  Homologous recombination
tang03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    140764229
   03460 Fanconi anemia pathway
    140764229
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tang04121]
    140764229
   03036 Chromosome and associated proteins [BR:tang03036]
    140764229
   03400 DNA repair and recombination proteins [BR:tang03400]
    140764229
Ubiquitin system [BR:tang04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    140764229
Chromosome and associated proteins [BR:tang03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     140764229
DNA repair and recombination proteins [BR:tang03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     140764229
   FA (Fanconi anemia) pathway
    Downstream FA components
     140764229
SSDB
Motif
Pfam: BRCA2 BRCA-2_OB1 BRCA-2_helical
Other DBs
NCBI-GeneID: 140764229
NCBI-ProteinID: XP_072958782
LinkDB
Position
8:join(16439962..16440127,16440227..16440343,16440459..16440590,16441439..16441570,16441707..16441847,16442042..16442122,16442365..16442505,16442647..16442781,16444064..16445075,16445165..16445205,16445283..16445410,16445484..16445638,16446338..16446460,16446554..16446787,16446863..16446944,16447021..16447071,16447160..16447232,16447335..16447446,16447528..16447599,16448446..16448629,16448705..16448887,16449246..16449388,16449459..16449521,16449603..16449816,16450039..16450206,16450306..16450374)
AA seq 1383 aa
MPEMPTWQILPTTDGHFRWVIAGQDSDLRQEIPVETLDTGDEISRLTSMADLFLQARPNI
LEDSAGAPMFRTGLGRSVTVSERSIKKGRSLVEGGDERFSDGCGAFPMFRTGSGKTVSVK
ESSIQKATVLLEGDVAGKGDERFGDGCGVFPMFQTASGKRVTVMESSIQKATTLLEGDIA
GKGATINLEDSRRNEAIPMFQTGSGKPVTVRGDSIRKAVSVLEIGAMRKGSGKRLSMRRS
SSQKAATVLEGEGVEKGFENSLEGCSGNEDFPVFRTGSGKPITVRQDSLKKAISVLEGEA
TMKKEEFVESTPAAHFPILCTGLGKELRARQSPIEEAEAVPEGEDVEKERLHKYDANGEY
SFSGSLFQTCSGKAVNISSDGLSRATTLLGLEGNDISAVQIFGLAGDKLGTRISPKWENS
RDRLWRNVSPRTAGICRLDPLNTQMGQREFNGCSRDFGMSGNQSFKNACQISRGSEVPTS
DSSQPPIRFHTAGGSSISISNNALQRARGLLGDSELEVLHKDVKVSQPLVSVPGDDTLFD
EISRNKENIPYDCFHEGVTRSINVSTNFSHLQSSSDLKQSAPVWSTDSQRYILNQVNTGA
FLLGKNCVSSSKISYVKESLHKDLCASTVSDTLIMPEENRIPGGPLVEISNHVGADHGYT
DRLNSEKRRLGRRNSISPFKRPRYSRFITPLNSSTSFSSGASTLSTIDDGCRRTSLSAHF
PFEFKRKKLKEFFGGPPPKVDLKGYVPDDVKHMIADNAAKYKFHDASGFARIGVEAFQNM
LLQSGASLSSVTKEWVENHYKWIVWKLACLERSYPAKASGKYLTISTVLEELKYRYEREV
NYGHRSTIKKILEGDASPASMMVLCVSAIRSHSDPKTCKLDDKTDIHENSEMLSSSTVAE
SNHAAKIELTDGWYSLDCIVDVLLSKQLLAGKLFVGQKLRICGASLRGWVGPISFAEVNT
VSLLIHMNGTYRARWDEPLGFCKGLCPPLAFRCIKGSGGKVPRTLVGVARIYPLLYKERF
PTGESVVRSERTERRALQLYQQRRSNIADDIIAEQPEFYENINDSDEGAKICKILESAAE
PEVIMAGMSAEQLMSFASYKAKQKAVRQSDTHKKIDKALQDAGLSSREVTPFVKVRVVGL
NNKISSRKIHPREGIITIWNPTEKQKIDLVEGQIYSVTGLTPLNYGTDVLYLQGRGSSTQ
WKPLPFNQTGNFELSFTPRKAVLLSNLGEVPLAREFDIAAVVLHVGDVYISGHQKKQWIF
MTDGSQCTSEMFEELYDCLLAVSFCSPIIDNDLTALFNHALSGTIVGFCNLVKRARDQIN
HIWVAEATEISTYCASYNLPGNSHLKEAADSNEKWAKVSYLTLQKLRERVLSIVGVDRRR
DLD
NT seq 4152 nt   +upstreamnt  +downstreamnt
atgcctgagatgccgacgtggcagatcctcccgaccaccgacggccacttccgatgggtc
atcgccgggcaagattccgatctccggcaggagatcccagtggaaaccctagataccgga
gacgagatatctcgacttacttccatggccgatctcttccttcaagctcgcccgaatatt
ctagaggacagcgccggagcaccgatgtttcgcacaggattggggaggtctgtcacggtg
agcgagagatcgattaagaagggaaggtctcttgttgagggaggagatgagagattttcg
gatggctgtggtgcatttccaatgtttcgaactggatctgggaaaacggtatcagtcaag
gaatcttcgatccagaaggcaacggttcttcttgaaggagatgtcgccggaaaaggagac
gagagatttggagatggttgtggtgtgtttccaatgtttcaaaccgcatccgggaaaagg
gttacagtaatggaatcttcaatccagaaggcaacaactcttcttgaaggagacattgct
ggaaaaggtgctacaataaacttagaggacagcagacgcaatgaggctattcctatgttt
caaactggatcaggaaaaccggttaccgtgagaggagactcaattaggaaggcagtttct
gttcttgaaataggggctatgaggaaagggtcagggaaaagattgagtatgagaaggtca
tcaagtcagaaagcagcaactgttcttgaaggagagggtgttgagaaaggttttgaaaat
agcttagagggctgcagtggcaatgaggactttcctgtgtttcgtactggatcagggaaa
ccaattacagtgagacaagactcacttaagaaggcaatttctgtgcttgaaggagaggct
acaatgaaaaaagaagaatttgtagagagcacccctgctgctcattttcctattctctgt
actggactggggaaagaattaagagcaagacagtcaccaattgaggaggcagaagctgtt
cctgagggagaggatgtggagaaagagagactgcataagtacgatgctaatggagagtac
agcttctctggttcacttttccagacatgctctggaaaagcagtaaatatttcttcagat
ggcctttccagagctactactttgttgggtttggagggaaatgacatctctgcagtgcaa
atttttgggctggcaggggataagttaggcacaagaataagtcctaaatgggaaaattca
cgtgacaggctctggagaaatgtgagtcctcgaactgctggcatatgtaggcttgatcct
ttgaatactcaaatgggtcagagagaattcaatggctgttcaagggattttggcatgtca
ggaaaccaatcatttaaaaatgcatgccaaatctctcgagggtctgaggtccctacatct
gattcttcccagcctccaattaggttccatactgcaggaggaagttccatatcaatttct
aataatgcattacagcgggcaaggggccttcttggtgactcagagttggaagttttacat
aaagatgtgaaagtaagtcagccattggtctctgttcctggagatgatacactatttgat
gagatctctcgcaacaaagaaaatataccttatgattgttttcatgaaggtgttacgagg
agcataaatgtatcaacaaacttctctcatttgcaatcatcttctgacttgaaacaatct
gctcctgtttggtctactgattctcagagatacatcctgaaccaagtgaatactggtgca
tttcttttggggaaaaattgtgtgtcaagcagcaaaatatcttatgtaaaagagtctttg
cacaaggacttgtgtgctagtacggtatctgacactctgataatgcccgaggaaaatagg
ataccaggtggacccctggttgaaatctctaaccacgtgggtgcagatcatggctatacg
gatcggctaaatagtgaaaagagaagacttggaagaagaaactctatctctccatttaaa
agaccacgctattctaggttcatcactcctttgaacagcagcacatccttctcttctggg
gcatcaacattatctactatagatgatggttgtcgcagaacgagtttgtccgctcatttt
ccatttgaatttaaaaggaagaagctaaaggaattttttggcgggcctcctcctaaagta
gacttgaaggggtatgtaccggatgacgtgaaacacatgattgcagacaatgcagcaaag
tacaaatttcatgatgcatctggttttgctaggatcggggtagaagcattccagaatatg
ctgcttcagtctggtgcttcattatcaagtgtaactaaagagtgggttgaaaaccactat
aaatggattgtttggaaacttgcatgtcttgagagatcatatccagctaaagctagtggc
aagtacttaacaatttctactgtgctcgaggaattaaaatatagatatgaaagggaagtc
aactatggccatagatcaacaataaagaaaatcctcgaaggggatgcttcacctgcttca
atgatggttctatgtgtttcggcaatccgttctcattctgatccaaagacgtgtaaatta
gatgataagaccgacatccatgaaaacagtgagatgcttagcagctcaactgtggctgaa
agtaatcatgctgcaaaaattgaattgactgatggatggtattcactggattgtattgta
gatgtgttgctttcaaaacaactactggctgggaaactttttgttgggcagaagcttcgg
atatgtggagctagtttacgtggctgggttggacctatttcttttgccgaggttaataca
gtcagtttattgatacatatgaatgggacgtatcgggcgcgctgggatgagcccttggga
ttttgtaagggtctttgccctccattggcatttaggtgcattaagggttctggtggtaaa
gttcctcgaactttggttggagttgcaaggatttatcccctactgtataaggagaggttc
cctactggagagtctgttgttagatcagagagaacggaaagaagagcacttcagctatac
cagcagaggagatctaacattgcagatgatattattgctgaacaaccagaattttatgaa
aacataaatgatagtgatgaaggggcaaaaatttgtaagattcttgagagtgctgctgag
ccagaagtcataatggcaggtatgagtgcggagcagctgatgtcttttgcatcttataag
gcgaaacaaaaggctgttaggcaatctgatacacataaaaagattgataaagctctgcaa
gatgcaggccttagttcgagggaagttactccatttgtgaaagtgagggtagtggggctc
aacaataaaatctcatcaagaaagatccaccctagggagggcataattacaatttggaat
cctacagaaaaacagaaaattgatttggtggaagggcaaatatactctgtcacaggactt
acgccgctaaactatggtactgatgtcctttacttgcaaggtagaggatcttctacacaa
tggaaacccttgcctttcaatcagactggaaattttgaactgtctttcacccctcgcaag
gcagtgctattgtcaaacttgggcgaggttcctcttgctagggaattcgacattgcagct
gtagttttgcatgtgggggatgtttatatatctggacatcagaagaagcagtggattttt
atgacagatggttctcaatgcacttcagagatgtttgaagaactatatgattgtcttcta
gctgtcagcttttgttcgcctatcattgataacgatttgactgcattatttaaccatgct
ctatcaggaaccattgttggattttgtaatcttgtaaagagagcaagagaccaaataaat
catatttgggtagctgaggcaacggaaatctccacttattgtgcttcttataaccttcct
ggtaattcccatctcaaggaagcagcagactctaacgagaaatgggcaaaagtatcttat
ttgaccctccagaagctcagggagagggttttaagcatagttggtgttgatagaagacga
gatttagattaa

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