Typha angustifolia (narrow-leaf cattail): 140764275
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Entry
140764275 CDS
T11061
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang00541
Biosynthesis of various nucleotide sugars
tang01100
Metabolic pathways
tang01250
Biosynthesis of nucleotide sugars
Module
tang_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
140764275
Enzymes [BR:
tang01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
140764275
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
NmrA
Acetyltransf_15
Motif
Other DBs
NCBI-GeneID:
140764275
NCBI-ProteinID:
XP_072958849
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Position
8:complement(join(13444710..13445174,13445328..13446878))
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AA seq
671 aa
AA seq
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MASYKPKNILITGAAGFIASHVANRLVRNYPDYKIVVLDKLDYCSNLKNLLPSRSSPNFK
FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMRGQPLPIHGDGSNVRSYLYCEDVAEAFEVVLH
RGEVGHVYNIGTKKERRVIDVAKDICKLFSLDPDAVIKFVDNRPFNDQRYFLDDQKLKNI
GWSERTIWEEGLRKTIEWYTSNPNWWGDVSGALLPHPRMLMMPGQFEGSEENKGMVYQFT
NNQMKLVVPTSKSSSQKPSLKFLIYGRTGWIGGLLGKICEKQDIPFEYGKGRLEERSQLL
LDVQTVKPTHVFNAAGVTGRPNVDWCESHKPDTIRTNVVGTLNLADVCREHGLLMMNYAT
GCIFEYDDGHPEGSGIGFKEEDKPNFAGSFYSKTKAMVEELLKEYENVCTLRVRMPISSD
LNNPRNFITKISRYNKVVNIPNSMTVLDELLPISVEMAKRNCKGIWNFTNPGVVSHNEIL
EMYKSYIDPKFKWANFTLEEQAKVIVAARSNNEMDASKLKNEFPELLSIKDSLIKYVFEP
NRKVPAGGIAD
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcatataaacctaagaacatcctgatcacaggggcagctggcttcattgcctct
catgttgccaaccgcctagtccggaactaccctgattacaagattgtggttctcgacaag
cttgactattgctctaatctaaagaaccttcttccttctcgttcatcccctaactttaaa
tttgtcaagggagatattgctagcgcggaccttgtcaacttcctcctgatcactgagtcc
attgataccattatgcactttgcagcccagacacatgttgacaattcttttggcaactca
tttgagttcactaagaataatatttatggtactcatgtcctccttgaggcctgcaaagtc
actggccagatccgacggttcattcatgttagtactgatgaagtttatggagagaccgat
gaggatgctgtggttggaaatcatgaagcctcccagctattgccgacaaacccttattct
gctaccaaagctggggcagagatgcttgttatggcatatggaagatcctatggattacct
gttataactactcgaggcaacaatgtgtacgggcccaatcagttccctgagaagcttatc
ccaaagtttatcctcttggccatgagaggacagcccctcccaattcatggagatggatct
aatgttaggagctatctctactgtgaggatgtcgcagaggcatttgaggttgttcttcac
cgtggagaagttgggcatgtttacaatatcgggacgaaaaaagagaggagagtgatagat
gtggcaaaggatatctgtaagcttttctcgctcgatcctgatgctgttattaaatttgtt
gacaacaggcccttcaatgatcaaagatacttcctagatgaccagaaactgaaaaatatt
gggtggtcagagcggactatatgggaggaaggactaaggaagactattgaatggtataca
agtaatcctaattggtggggcgatgtttctggtgcacttttgcctcatccaaggatgcta
atgatgcctggtcagtttgagggctctgaagagaacaagggcatggtttatcagttcacg
aacaatcagatgaagttggtggttcctacttcaaagagcagttctcagaagccctccctt
aaattcttgatttatggtaggactggatggattggtgggcttcttgggaagatatgtgag
aagcaagatataccatttgaatatggaaagggtcgtctcgaagagcgttctcagctctta
ttagatgttcagactgtgaaaccaacacatgtcttcaatgctgctggtgtaactggtaga
cctaacgttgactggtgtgaatctcacaagccagacactattcgcaccaatgttgtgggt
actttaaatctagcagacgtctgcagagaacatgggttattaatgatgaattatgctaca
gggtgcatttttgaatatgatgatggacacccagaagggtcaggcattggatttaaggag
gaagacaagccaaactttgctggctcattctactcgaagaccaaggctatggttgaagag
cttttgaaagagtacgagaatgtctgcactctacgagttcgtatgcctatatcttctgac
ctcaacaatccacgcaattttattacaaagatatctcgttacaataaagtggtgaacatt
ccaaacagtatgacagtcttggatgagcttctgccaatatcagttgagatggcaaaaagg
aattgtaagggcatatggaacttcactaatcctggcgttgtcagtcacaatgagatcttg
gagatgtacaagagctacattgatcccaaatttaagtgggccaattttacccttgaagag
caggcaaaagtaattgttgcagcccgaagcaacaacgagatggatgcttcaaagttgaag
aatgaattcccagagttgctatctatcaaagactcactgatcaagtatgtttttgagccc
aacaggaaggttccggctggtgggatagctgattga
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