KEGG   Typha angustifolia (narrow-leaf cattail): 140764320
Entry
140764320         CDS       T11061                                 
Name
(RefSeq) nuclear pore complex protein NUP93A-like
  KO
K14309  nuclear pore complex protein Nup93
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    140764320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140764320
Messenger RNA biogenesis [BR:tang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     140764320
SSDB
Motif
Pfam: Nic96 Clathrin HTH_RNase_II TPR_2 RdRP_4
Other DBs
NCBI-GeneID: 140764320
NCBI-ProteinID: XP_072958935
LinkDB
Position
8:join(1268472..1268573,1268690..1268781,1268913..1268979,1269381..1269440,1270176..1270265,1270778..1271047,1271279..1271374,1271560..1271691,1272383..1272436,1272541..1272624,1273457..1273543,1273609..1274511,1275764..1275945,1277327..1277618,1278874..1278951)
AA seq 862 aa
MASDAEMSGWSDLLQSSTKLLEQAAPSAQFPPLQRSLDQLEALSTKLKTRTLRAETPSQS
ISATRLLAREGINAEQLARDLKSFELKTTLEDVFPSEATTVEEYLQQVHEMAMVSSIQEA
QKDNLRSFSDYMMKVLEDDWQKEKRDFLQSLSRLSTLPRTNSSLATSGLSRLGQVSSPIS
SPQISAGPSAVGVLPIANKSIIEKKTSVYAEIVRNLNGARGRGLPFKPATTFRSAYEGLG
IDVSGVKSVTMQKIWHLIQALVGEDSSQQNVSRKMSLVIGARRHLEWGHEKYIIDAIQSH
PAQAALGGAVGNLQKIRAFLRVRLRDHGVLDFDATDMRRQPPVDTTWQQIYFCLRTGYYD
EARNVAQSSRVAHNFAPQLVEWISTGGAVSPETALAASEECEKMLRMGDRAGRPSYDRKK
LLLYAIISGCRRQIDRLLRDLPTLFNTIEDFLWFKLSVVRDLPSASSSVVLSEGFVPYSL
DDLQGYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLPAVLYLSKEVGEEGYNIDAVHISI
ALADHGVLTEGAGTGHKMGVMDACAEAASIIQQYGSIYLRHNNLELALEYYAQAAAAMGG
GEMSWIGRGNTDQQRQRSLMLKQLMTEILLRDGGIALLLGPRGVGEEGELRKYMMDWRSR
QQFLLEVAHQCQEAGLYEKSIEIHKRVGAFAMALETINKCLSDAICSMSRGRSDSESRAA
SLINSGNDILETFKYSSDSSLQDKDLVSEKQTVLRQLEAILFVHKLTRAGQHVDALREIT
KLSFLPLNPRGPDVTIDVFRNLSPHVQACVPELLKVALSCMDNVTDTDGTLRALKSKIAN
FVANNMTRNWPQDLCEKIARSI
NT seq 2589 nt   +upstreamnt  +downstreamnt
atggcgagcgacgcggagatgagcgggtggtcggatctgctccagtcctccaccaagctc
ctcgagcaagcggccccatccgctcagttccctcctctccagaggagtctggaccaattg
gaggcgctttccactaagcttaagaccagaaccctacgtgccgaaaccccctcgcagtcc
atctccgctacgaggcttcttgcacgggaaggcataaatgcggagcaacttgcgagggat
ctcaagtctttcgaactgaagacaactttggaggatgttttcccttcggaggcaacaact
gttgaggagtacctgcaacaggttcatgagatggctatggtctcatccatccaggaagct
caaaaggacaatctccgaagctttagtgattatatgatgaaagtcttggaggatgactgg
cagaaggagaagagagacttcttgcagagtttaagccggctatcgacgttacccaggaca
aatagtagtcttgcaacaagtgggctttctcggcttggtcaggtgtcatccccaatttcc
agtcctcaaatatctgctggcccatcagccgtaggggtattaccaatagctaacaagtca
ataattgaaaagaagacttcagtgtatgccgagattgtcaggaatctgaatggtgctaga
gggcgtgggctgcctttcaaacctgccacaactttccggtctgcttacgaaggcttggga
attgatgtttctggtgtgaagtcagttactatgcagaaaatctggcatttgattcaggca
ttggttggtgaggattctagtcagcaaaatgtttcgaggaaaatgtcactggtgataggg
gctagacgccaccttgaatggggccatgagaagtacatcatcgatgccatccagagtcat
ccagcgcaggctgctcttggtggggctgttggcaatctgcagaaaattcgggcttttctt
cgggtccgtttacgtgatcatggcgtactagactttgatgcaactgatatgcgtaggcag
cctccagttgacacaacatggcaacagatttacttctgcttaagaacgggatattatgat
gaagccagaaatgttgctcaatcatctcgtgttgcacacaactttgcccctcagcttgta
gagtggatttcgactgggggtgctgtttcaccagagactgctcttgccgcttctgaagaa
tgtgagaaaatgttgagaatgggtgatcgtgctggtcggcctagttatgacaggaagaaa
ttgctactctatgctatcatttctggttgtcgccgtcagattgatcgattgctaagggac
cttccaaccctttttaatactatagaggatttcttgtggttcaaattgtcagtggtgagg
gacttgccaagtgcatcttcttctgttgttctaagtgaagggtttgttccatacagtcta
gacgatctccaaggctacttaaataaattcgaaccatcttactatacaaaaaatgggaag
gatcctttagtttatccttacgtgttacttttgagcattcagctacttccagcagtcctg
tacttgtccaaggaagttggagaggaaggatataatattgatgctgtacatatctctatt
gctctagctgatcacggcgttcttactgaaggtgctggaactgggcacaagatgggggtc
atggatgcgtgtgcagaagcagccagcataattcagcagtatggttccatctacttacgt
cataataatcttgaactagcattggagtattacgcacaagctgctgctgcaatgggtgga
ggagagatgtcatggattgggcgaggcaacacggatcagcaaagacagcgaagtttgatg
ttgaaacaacttatgacagagatattattaagagacggtggtatcgctcttctacttggt
ccaaggggcgtgggagaagaaggggaacttagaaaatatatgatggattggagaagtcga
cagcagttcttacttgaagttgctcatcaatgtcaagaagctgggctatatgaaaaatcc
atagaaattcataaaagagttggagcttttgctatggcattagagacgataaacaaatgt
ctctcagatgcaatctgttccatgtcgcggggcaggtcagatagtgagagccgtgctgct
agtctaataaattctggcaatgatattctggagacattcaagtattcttctgattccagc
cttcaagacaaggatctcgtttctgagaagcaaacagtactaaggcagcttgaagctatc
ttatttgtccataagctcaccagagcagggcagcatgtggatgctttgagggagatcacg
aaactttcattccttccattgaatcctcgaggaccagatgttaccattgatgtattccgg
aatttatccccccatgttcaagcatgtgtgcctgaactcctcaaggttgctcttagttgc
atggacaatgtcactgatactgatggaacgctccgcgctttgaagtccaagattgcgaac
tttgtagccaacaatatgaccaggaattggccgcaggatttgtgtgagaagattgcccga
agcatatga

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