Typha angustifolia (narrow-leaf cattail): 140764333
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Entry
140764333 CDS
T11061
Name
(RefSeq) coatomer subunit beta-1
KO
K17301
coatomer subunit beta
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140764333
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tang04147
]
140764333
Membrane trafficking [BR:
tang04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
140764333
Exosome [BR:
tang04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
140764333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
INTS1_R4
Coatomer_g_Cpla
RAG2
Motif
Other DBs
NCBI-GeneID:
140764333
NCBI-ProteinID:
XP_072958953
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All DBs
Position
8:complement(join(3313662..3313866,3314008..3314093,3315383..3315892,3317019..3319070))
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AA seq
950 aa
AA seq
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MEKSCTLVIHFDKGSPAMANEIKEALEGNDVESKIDALKKAIMLLLNGETLPQIFITIVR
YVLPSEDHTIQKLLLLYLEIIDKTDSRGRVLPEMILICQNLRNSLQHPNEYIRGVTLRFL
CRLSEPEIIEPLVPSVLANLEHRHPFIRRHALLAVSAIYRLPQGEQLLPDAPDLVEKALA
SEQDPSARRNAFLMLCNCAQERAVAHLLTNADRVPDWGDLLQMAALDLIRKVCRSNRADK
GKYIKIIISLLGSPNTAVVYECASTLVSLSSAPTAIRAAANTYCQLLASQSDNNVKLIVL
DRLNELRSSHREVMVEVVMDVLRALSSPNLDIRRKVLDIVLELITPRNIDEVVLVLKKEV
VKTQSGELEKNGEYRQMLVQAIHSCAIKFPEVAASVVHLLMDFLGDSNVASAIDVVLFVR
EIIETNPKLRVSMIQRLIDTFYQIRASRVCSCALWILGEYSLSLSEVESAIATIKQCLGD
LPFYTTSEDGDSADASKPSAPVNSSVTVSSRRPVILADGTYATQSAASETAIAAPTVVPG
SLAVTANLRSLILSGDFFLGAVVACTLTKLVLRLEEVQPSKFEANKACTEALLIMVSILQ
LGQSSYLPHPIDNDSYDRISLCIKLLCNTGDEVRKIWLQSCRQSFAKMLAEKLFRETEEI
KAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFTKDTDDANKLNRIL
QLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVDRPQNYTL
APESSKQIRANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPATCADV
TFRNMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTPPSALDGECGFLAANLYAK
SVFGEDALVNVSIEKQADGKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcgtgcaccctcgtgatccacttcgacaagggcagccctgccatggcgaac
gagatcaaggaagccctcgagggcaacgacgtggaatccaagatcgacgctctcaagaag
gccatcatgctcctcctcaacggcgaaaccctacctcagatcttcatcaccatcgtccgc
tacgttctcccgtcggaggaccacacgatccagaagctccttctcctctacctcgagatc
atcgacaagaccgattcccgcggccgcgtcctgccggagatgatcctgatctgccagaat
cttcgcaacagtctacagcacccgaacgagtacatccgcggcgtcaccctccgcttcctt
tgccgcctctccgagccggagattatcgagccgctcgtgccgtcggtcctcgcgaatctc
gagcaccgccaccccttcatccgccgtcatgccctcttagccgtctccgccatttatcgc
ctcccgcagggcgagcagctcctcccagacgcgcctgatctggtggaaaaagcgcttgct
tcggagcaagatccctccgcccgccgcaatgccttcttgatgctttgtaactgtgcccag
gaacgtgccgttgctcacctcctcaccaatgccgaccgtgtacccgattggggcgatcta
ctccaaatggctgccctggatcttattcgcaaggtctgcagatccaaccgtgctgataag
gggaagtacattaaaattataatatcacttcttggatcccccaatactgctgttgtctat
gaatgcgccagcacactcgtttcgctctcttccgcccccactgccattcgtgccgccgcc
aacacctactgccagctcctcgcgtcgcagagtgacaacaatgttaagcttattgtcctc
gaccgcctcaatgagctccgatcctcccaccgcgaggtcatggtcgaggtcgtgatggat
gttctccgtgctctctcgagccccaatcttgatatccgacgaaaggtgctcgacattgtg
ctcgagctcattacacctaggaatatcgacgaggttgtgctcgtcctcaagaaggaggtt
gttaagacgcagagcggtgagcttgagaagaacggcgagtaccgccagatgcttgttcag
gcgatccactcgtgcgccattaagttccctgaggttgctgcgtctgttgttcatcttttg
atggatttcctcggagacagcaatgtagcgtccgccatcgacgtggtcctctttgtgagg
gagatcatcgagacaaacccaaagcttagggtctccatgatccagcggttgatagataca
ttttaccagatccgggcttcccgggtttgttcctgtgccctttggatccttggggagtac
tcactctctctgtctgaagtggagagtgccattgctaccattaaacagtgccttggagat
ctccccttctacactacctcagaggacggggattcggcagatgcctcaaagccatctgcg
ccagtgaactcctctgtcactgtttcttcaaggaggccggtgattctggcagatggtaca
tacgctactcagagtgctgcttctgagactgctattgccgctcctacagttgtgccagga
tccttggctgtgactgcaaatttgaggtctttaattctgtctggtgacttcttcttgggt
gccgtcgtggcttgcactttgactaagcttgtactgaggctagaggaggttcagccctca
aaatttgaagcaaacaaagcatgcactgaggccttgttaatcatggtctccattctgcag
ttagggcagtcttcatatcttccccaccctattgataatgattcttacgacaggatttcc
ctctgcataaagttgctctgcaatactggtgatgaagttagaaagatatggctgcagtcg
tgccggcagagttttgcaaagatgcttgcagagaagctattcagggagacggaggagatc
aaagcaaaggcccagatttctcatgcacagccagatgatcttattgacttctaccatttg
aagagtaggaagggtatgagccagcttgagttggaggatgaagtccaagatgatttaaaa
cgtgcaactggagagttcacaaaggatacagatgatgcaaataaattgaatcgcattctt
caacttacaggatttagcgatcctgtttatgctgaagcatatgttacagttcatcactat
gacatagtcctcgatgttactgtcattaatcggacaaaggaaacacttcagaacttgtgc
ttggaattggcaactatgggagacctgaaacttgttgaccgaccgcagaactacacatta
gcaccggaatcgagtaagcagattagggccaatattaaggtctcttcaacagagactgga
gtaatttttggcaacattgtatatgagacttcaaatgtgcttgagagaactgttgttgtc
ctcaacgacattcacatcgacattatggactacatttctcctgctacatgtgctgatgtt
acatttagaaacatgtgggcagaattcgagtgggaaaataaggtggctgtgaacactgtg
attcaggatgagaaagaatttttagaccacatcatcaaatctacaaatatgaagtgtctc
actccaccgtccgcactcgatggggaatgtgggtttcttgcagctaatctttatgcaaag
agtgtgtttggggaagatgctttggtgaatgttagtattgagaagcaggcagatgggaag
ctcagcggatacatcaggattaggagcaagacacaaggaatcgcgctcagcttaggagac
aagatcactcttaaacagaaaggaggaagttaa
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