| Entry |
|
|---|
| Name |
(RefSeq) ATP-dependent RNA helicase DEAH13 isoform X1
|
|---|
| KO |
|
|---|
| Organism |
tang Typha angustifolia (narrow-leaf cattail)
|
|---|
| Brite |
KEGG Orthology (KO) [BR:tang00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:tang03009]
140764379
Enzymes [BR:tang01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
140764379
Ribosome biogenesis [BR:tang03009]
Eukaryotic type
90S particles
Helicases
140764379
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
8:join(764694..764779,764885..764957,765052..765126,765219..765268,765375..765435,765520..765888,766328..766534,766619..766849,767357..767470,767549..768733,768827..770287)
|
|---|
| AA seq |
1303 aa
MGSRLGDHSQSLDATVALLEPDAIQDGLDSNGDGSNAIILFDKKKSKLKGEGEVSKKSKN
REAPAMSKSMQRKLKKLEEEKQSKLLQAKSIKLLGKYKIGDGAYSLLHSSGTIGQAETLK
EKRRRAVQLSKAGLEVPDEVSPFKKISQKDSEETDVTQKFDSVLPMKCKEQENKTLSISL
GTEAEATGKSQPVMDIGLSVPPPLAETDEDIGIKKPEDQRNSTSTLRPCQMEQGINSQAR
GVDLMIQEHVNVAPTLVHVSRPHEIEEKRKDLPIVMMEQEIMEAINEHSIVILCGETGCG
KTTQVPQFLYEAGFGSSDRFDRKGIIGVTQPRRVAVLATAKRVSFELGLRLGKEVGFQVR
HDKMIGQSCSIKFMTDGILLREVQSDFLLKRYSVVILDEAHERSLNTDILLGMLSRVIRL
RKKLYMEQQEKILSGVSISQENMVSQLKVVLMSATLRVEDFISNRKLFSDIPPVLEVPVR
QFPVTIHFSKKTQEDYIGQAYKKVMSIHKRLPPGGILVFVTGQREVEFLCKKLRKASRWP
TEQRSLGQAGNEITASSEMEMKDISEAYEIGSNSPHHQTDRFNSYNEDDSIPEMSYDSSD
FETQSEAEDDSDDEDSITCEAPEKDGLVLDFLRDVESVSLLKASFEALAGKPSDQNCKDE
SSRLVAPAADKSTESTAVSAGPLYVLPLYSMLPASAQLRVFENVPEGERLVVVATNVAET
SLTIPGIKYVVDTGKEKVKNYNYTNGIAAYEVQWISKASAAQRAGRAGRTGPGHCYRLYS
SAAYSKNNLFPEFSFPEISMIPVDGVVLLMKFMGIDKVANFPFPTPPEVEALVEAERCLK
ALEALDSQGGLTPIGRAMAQYPMSPRHSRMLLTVIQIMKHQQGYSRSNLVLGYAIAAASA
LSFSSPLLVQFGEEHEINDQMDQEEKLDVDNLKDLQEKNRQKKIKAMAREARTRFRNPSS
DALTIAYALQLFELAENSVEFCRSNSLHLKTMEEMSKLRKQLLQLTFHHSKFCEEFAWNH
GNAEDVELSWRVHSSKQPLQMNEEEILGQAICAGWADRVAKRVRSFRQSAENDTKARAVR
YQSCAHKDTVYLHRWSSVSQSAPDYLVYSELLHTKRPYMHGVTSVKSDWLLKYASSLCTF
SSPLTDPKPYYEPLSDKVFCWVSPTFGQHNWQLPLHSLFIKNGALRMSVFSCALLEGDVL
PCLRSFQKFLAAPPSTVLKPSALGQRRVGDLLNKMKIGSRVIDSRAMLRDAWSENPDFLY
SEIRQWFQEGFHNRFREVWEQMHHEVLLEGHELFPKRAKKGRK |
|---|
| NT seq |
3912 nt +upstreamnt +downstreamnt
atgggctcgagattgggggatcatagtcagtctttggatgccactgttgcactcttggaa
ccagacgctattcaagacggattggattctaatggggatggaagcaacgcaattattttg
tttgacaagaaaaagagcaaattgaaaggagaaggcgaggtatctaagaagagcaagaat
agagaagctccagccatgagcaaaagcatgcaaaggaagttaaagaagttggaggaggag
aagcaaagtaagttgctgcaagccaaaagtattaagcttctggggaagtataaaataggg
gatggtgcatattctcttctccattcttcagggactattggtcaagccgagactttgaag
gaaaaacggaggcgtgctgtacagttgtctaaggcaggattggaggtacctgatgaagtc
tcacctttcaaaaagatcagtcagaaagattctgaggagactgatgtcacacagaaattt
gattctgttcttccgatgaaatgtaaggagcaagagaataagactcttagcatttctctt
ggaactgaagcagaggcaactggtaagagccaaccagttatggatattggattaagtgtg
ccacccccattagcagaaacagatgaagacattggtattaaaaagccagaagatcagagg
aactccacatccactttaagaccttgtcagatggaacaagggattaattcacaggccaga
ggggtagatcttatgatccaggaacatgtgaatgttgccccaactttagtgcatgtatca
aggccacatgagattgaggagaaaaggaaggatctccctatagtaatgatggaacaggaa
ataatggaagctatcaatgaacattctattgtaattttatgtggagaaacaggatgtgga
aaaactacacaggttcctcagttcttatatgaagctggtttcggttcaagtgaccgtttt
gacagaaaaggaatcataggcgtaacacaaccacgtcgtgttgcggttcttgccactgcc
aagcgagtatcctttgagttaggactccgtcttggaaaggaggttggttttcaagttagg
catgataaaatgataggccaaagctgctccatcaagttcatgactgacggaattttactt
cgagaagtccagagtgattttctgttgaagcgctattctgtggtcatcttggatgaagcc
catgaaaggagcttgaacacagatatactacttggcatgctatcacgagtaataagactt
cgcaagaaattatatatggaacagcaggagaagatactgtctggagtgagcatcagtcaa
gaaaatatggtcagtcagttgaaagttgtgctaatgagtgctaccttgcgagttgaggac
ttcatttcaaacaggaaactgttctccgatatcccgccagttctagaggttcctgtcaga
cagtttcccgtgacaattcacttctcaaaaaagacacaagaagactatataggtcaagct
tataagaaggtcatgtcaatccacaagagactcccacctggtggaatacttgtgtttgtt
actggacagagggaagtggaattcttgtgtaagaagttacggaaagcatcacggtggcct
actgaacaaagatccttgggacaagcaggtaatgagatcactgcaagctcagagatggaa
atgaaggatatttctgaagcatatgagataggaagcaattcaccccatcaccaaactgac
agatttaactcatacaatgaggatgacagcattccagagatgagttatgattcatccgac
ttcgaaacacagagtgaggctgaagatgatagtgatgatgaagattctatcacctgtgaa
gccccagaaaaggatggtttggtgttagattttctaagagatgttgagagtgtctcttta
ctgaaagcttcttttgaggctctagctggaaagccaagtgatcaaaattgcaaagacgaa
tcaagtcgtcttgttgctcctgctgcagataagagcacagaatctactgctgtttctgct
ggtccactctatgttttgccactttattcaatgctacctgcttctgctcagctccgtgta
tttgaaaatgtacctgaaggggaaagacttgttgtagtagcaactaatgttgctgagact
tcgttaactattcccggaataaaatatgtagttgatactggcaaagaaaaggtcaaaaat
tataattacaccaacggaatagcagcatatgaagttcagtggataagcaaagcatcagct
gctcagcgtgcaggaagagctggaaggacaggacctgggcactgttatcgcctctactct
tctgcagcctacagtaaaaataatttatttcctgagttctcctttcctgagatttccatg
attccagttgatggtgttgtactcctgatgaagtttatgggtattgacaaggttgcaaac
tttccattcccaacccctcctgaggtcgaagctttggtggaagctgagcgctgcttaaag
gcccttgaggcacttgatagccaaggcggacttacacctatagggagggccatggcacaa
tatcctatgagtcctcgtcattctcgtatgcttttgacagttattcagatcatgaagcat
cagcaaggctatagccgttcaaatttggtacttggatatgctattgctgctgcctcagct
ttaagtttttctagtcctttacttgtgcagtttggggaggagcatgaaataaatgatcag
atggatcaggaagagaaacttgatgttgataacttgaaggacctacaggaaaagaataga
cagaagaaaataaaagctatggcaagagaggcacgaacaagatttcgtaatcccagcagt
gatgcactgacaattgcttatgctttgcagttatttgaactggcagagaactctgtggag
ttctgcagaagcaactcacttcacttgaagacgatggaagagatgtcgaagttgagaaaa
caactgctgcagctgacattccatcatagcaagttttgtgaggaatttgcatggaatcat
ggaaatgctgaggatgtagagctctcttggagggtacactctagtaagcagcctttacaa
atgaatgaagaggagattttagggcaagctatatgcgctggatgggctgacagagttgca
aagcgtgttcgttcatttcgtcaatcagcagaaaacgatacaaaggccagagctgttcgc
tatcaatcttgtgctcataaagatactgtgtatctccatcgttggtcttctgtttctcag
tctgcaccggactatctagtttattcggaacttcttcacacaaagaggccttatatgcat
ggagtaacaagtgttaagtcagattggcttcttaagtatgctagttctctttgcaccttt
tcatccccgttgacagaccctaaaccatattatgaacctctaagtgacaaggtcttttgt
tgggtcagtcccacttttggccagcataattggcagcttccattgcatagtttatttata
aagaatggtgcccttcggatgtctgtattttcatgtgctttgctagagggggatgtcttg
ccatgtttaaggtcctttcagaaattcctggcagcacctccatccactgtactgaaacct
tcggcattgggtcaaagaagggttggggatcttctaaacaaaatgaagattggctcaaga
gtgattgatagccgtgcaatgctaagagatgcatggagtgaaaatcctgatttcctttat
tctgagattcgacaatggttccaggagggatttcataatcgtttcagagaagtctgggaa
cagatgcaccatgaggttcttcttgagggccatgagctatttcccaagagggcaaagaaa
ggaagaaagtag |
|---|
