KEGG T11061: 140764528

Typha angustifolia (narrow-leaf cattail): 140764528

Entry

140764528         CDS       T11061

Name

(RefSeq) protein argonaute 1A-like isoform X1

K11593

eukaryotic translation initiation factor 2C

Organism

tang Typha angustifolia (narrow-leaf cattail)

Brite

KEGG Orthology (KO) [BR:tang00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140764528
   03036 Chromosome and associated proteins [BR:tang03036]
    140764528
Messenger RNA biogenesis [BR:tang03019]
Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     140764528
Chromosome and associated proteins [BR:tang03036]
Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    140764528
   RNA interference (RNAi) pathway
    RITS (RNA-induced transcriptional silencing) complex
     140764528
   microRNA pathway
    RISC loading complex
     140764528

SSDB

Motif

Pfam:

Piwi ArgoN PAZ Gly-rich_Ago1 ArgoL1 ArgoL2 ArgoMid MRP-S32 Piwi_N

Other DBs

NCBI-GeneID:

140764528

NCBI-ProteinID:

XP_072959230

LinkDB

Position

8:join(3005715..3005766,3006843..3007552,3007659..3007867,3007944..3008093,3008183..3008316,3008639..3008748,3008897..3009003,3009160..3009298,3009439..3009555,3010759..3010866,3010954..3011025,3012323..3012445,3012552..3012717,3012806..3012927,3013002..3013139,3013252..3013394,3013512..3013574,3013643..3013706,3013805..3013940,3014024..3014097,3014182..3014276,3014377..3014408,3014511..3014725)

AA seq 1092 aa
MGGRVLTCHRCFSLYLSTVIMPRKRRTGPPSATGSSESPEASSSAEPRVPQPSERAPMPQ
QQGRGGRGHGLVLDDPQLSQQGGRGGRSAGHYHSRGGLVSQQGGGPSSEYQRHGGSQARG
GMPPQQHYGGRRGGGSMAGGRGGPVTAGPSRTVPELHQATQVPYQVTQPVPPPSEASSKS
QSVEVFSGQVEEQFQHLDIQGQASSSQAIQPAVSSSKSVRFPLRPGKGSFGDRCIVKANH
FFAELPDKDLHQYDVSISPEVTSRGVNRAVMAELVKLYRQSHLGGRLPAYDGRKSLYTAG
PLPFPSKNFEITLYDEEEGLGGQRRERVFKVVIKFAARADLHHLAMFLTGRQPDAPQEAL
QVLDIVLRELPTARYSPVGRSFYSPNLGRRQKLGEGLESWRGFYQSIRPTQMGLSLNIDM
SSTAFIEPLPVIDFVAQLLNRDISVRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRIS
GLTSQATRELTFPVDDHGTMKSVVQYFQETYGFNIQHTFLPCLQVGNQQRPNYLPMEVCK
IVEGQRYSKRLNEKQITALLKVTCQRPHERELDILQTVHHNAYHEDPYAQEFGIRIDEKL
ASVEARILPAPWLKYHDTGREKDCLPKVGQWNMMNKKMVNGGRVNNWTCINFSRSVQDNA
ARGFCYELALMCQVSGMDFALEPVLPPLTARPEHVERALKSRYQEVMRILKSHGRELDLL
IVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTV
LMDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQA
HRQELIQDLFKVGQDPQRGPVTGGMIRELLISFKKSTGQKPQRIIFYRDGVSEGQFYQVL
LYELDAIRKACVSLEPDYQPPVTFVVVQKRHHTRLFANNHNDQRSVDRSGNILPGTVVDS
KICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADALQSLTNNLCYTYARCTRSVS
IVPPAYYAHLAAFRARFYLEPETSDSGSMASGVAVGRGVPTGGPRSTRTPGSVAVRPLPA
LKENVKRVMFYC

NT seq 3279 nt +upstreamnt +downstreamnt
atgggtggcagagttttgacatgccaccggtgtttctcactttatctttctactgtaatc
atgccgaggaaaagaagaactggacctcctagtgctaccgggagttcagagtctccagaa
gccagtagcagtgctgaacctcgtgttccccagccttctgaaagggctccaatgccacaa
cagcagggtaggggaggaagaggacatggtttggttctagatgatcctcagctctctcaa
caaggaggccgtggtggtcgcagtgctggacactaccacagtcgtgggggactagtttca
cagcagggaggtggcccatcttccgagtaccagcgacatgggggttcccaggcaagaggt
ggtatgccaccacagcagcattatggcggacgcaggggtggtggtagcatggcaggtggg
cgtgggggtcctgtaactgctggtccgtcgaggacagttcccgagctgcaccaagcaacc
caggttccatatcaagtcactcagccagtaccacctccatcagaagctagttcaaagtca
caatctgtggaggtgttctctggtcaagttgaagagcagtttcaacatcttgatatccag
ggccaagcttcttctagccaggcgattcaaccagcagtatcctcaagcaaatcagttaga
tttccacttcgccctggcaagggtagttttggagataggtgcattgtgaaggcaaaccat
ttctttgctgagttgcctgacaaagaccttcaccagtacgatgtctctatttcacctgaa
gtgacctcccgtggtgtgaatcgtgcggtcatggcggagctagtaaaactatacaggcag
tctcatctaggtggccgccttccagcttatgatggcaggaagagcctttataccgccggg
ccacttccgttcccctccaagaattttgaaataacattatatgacgaggaagaaggtcta
ggtggccagaggagagagagggtcttcaaagttgtcatcaagtttgcagcacgtgctgat
cttcaccatttagctatgtttttaactgggaggcagccagatgcaccccaagaagccctt
caagttcttgacattgtactacgtgaactgcctactgcgagatattcaccagttggtcgg
tcattttattcacctaatttaggaagacgtcaaaagcttggtgaaggattggaaagttgg
cgtggcttctatcagagtatacgccccactcagatgggactatcgcttaatattgatatg
tcttcaactgctttcattgaacctttgccggtaatcgactttgtcgcacagcttctgaac
agagacatttcagttagaccattatctgatgctgatcgtgtgaagatcaagaaggctctg
agaggtgtgaaggttgaggttacacatcgaggcaatatgcgtagaaaataccgcatatct
ggtctaacatcacaggcaactagagaattaacgttccccgttgatgaccatggtacaatg
aagtctgttgtccaatactttcaggagacctatggttttaatatacaacataccttttta
ccttgtttgcaagttggaaatcaacagcggccgaattatcttcccatggaggtatgcaag
attgttgaaggacaaaggtactcaaagagattgaatgagaaacagataactgctctcctt
aaggtgacctgccagcgtcctcatgagcgggagctagacatactgcagactgttcaccac
aatgcataccatgaagacccatacgcccaagagtttggtataagaattgatgagaaactt
gcttcagttgaggctcgtattctaccagctccatggcttaaataccacgatactggtaga
gagaaggattgcttgcccaaagttggtcagtggaatatgatgaataagaaaatggtcaac
ggtgggagggtaaataactggacatgcataaacttttcacgaagtgttcaagataatgct
gccagggggttttgctacgagttggcgctgatgtgccaagtatctggaatggactttgca
ctagagcctgtccttcctccattaactgctcggcctgagcatgtggaaagagctctcaaa
tcgcggtatcaggaggtcatgagaatacttaaatcacatggtagggagcttgatttgctg
attgtgatattgcctgacaataatggctctctatatggggacctgaaaagaatatgtgag
acagaccttggattagtctcacaatgttgtctgacgaagcatgtgtttaagatgagcaag
caatatcttgcaaatgttgctcttaagatcaatgttaaggttggaggaagaaatactgta
ctaatggatgctctgacaaggaggatacctctggtcagtgacagaccgacaattatattt
ggtgctgatgtaactcatcctcatcctggagaggattccagcccttccattgcagctgtt
gttgcttctcaagattggccagaggtcaccaagtatgctggattagttagtgcacaagcc
catcgtcaagagctgatccaggatctgtttaaagttgggcaagatccacaacgcggacca
gtcactggtggcatgattagggagcttctcatttcgttcaaaaaatcaactgggcagaaa
cctcagcgaattatattttacagggatggtgttagtgagggacaattttatcaagtatta
ttgtatgaactcgatgccatccgaaaggcatgtgtttcattggagcctgattatcagcca
ccggtgacatttgttgttgttcagaagaggcatcatacacgtctgtttgctaataatcat
aatgatcagcggtctgtggataggagtggaaatatattgccaggcacagtggttgattct
aagatttgccatccaactgagtttgatttctacctttgtagtcatgccggcattcaggga
acaagccgccctgctcactaccatgttttgtgggatgagaataaattcactgccgatgca
ctgcaatctctcacaaacaacctgtgctacacctatgctaggtgcacccgctctgtgtca
atagtgcctcctgcatattatgctcatcttgctgcattccgtgctcggttttacttggaa
cctgagacgtcagatagtgggtcaatggcaagcggtgtggctgtcggccgtggagttcct
accggtggtcctcgcagtacaaggacacctggaagcgttgcggtcaggcctctgcctgct
ctgaaggagaatgttaaaagggtcatgttctattgttag

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