KEGG   Typha angustifolia (narrow-leaf cattail): 140764548
Entry
140764548         CDS       T11061                                 
Name
(RefSeq) la-related protein 1A-like isoform X1
  KO
K18757  la-related protein 1
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140764548
Messenger RNA biogenesis [BR:tang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     140764548
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 140764548
NCBI-ProteinID: XP_072959258
LinkDB
Position
8:join(15556767..15557072,15559540..15560125,15560216..15560375,15560713..15560803,15560931..15561002,15561148..15561321,15561405..15561784,15562832..15562901,15564025..15564129,15564321..15564658,15564737..15564880,15564994..15565057,15565785..15565930,15566052..15566156,15566802..15567030)
AA seq 989 aa
MESGIPPEAAAAVDGVAPEVEEAAGDAGRSSPWRMPPDTAAAAAAEAEGSVMGAESWPTL
SDARPKGPVSAGPKVSVAAAGNVGAGPKNGPPPPPPAHVPTQGSVGLRKSDGYGSGNPPN
KHHQVRPHKHGAKRNLPANGAPPFPVPLPYNLQAGQPMFYPVVQPPPLFIHEYAYQTGPM
PFQNNDPHIVKSGGEPPRPPFIPNGQAGGNNGNRMVPPPRGDPNTWHPSPGNSISRPHNA
HEPANQYNQTWCNQRAFGPRHHMNMPPGMGPRTFVRPIPHFVGPAAGYINRPAFPGNGIA
PMYYMPAAPLEMMRGPPRFITQPCPPTYPILTSEEVELRSKIVKQIEYYFSDENLQKDNY
LISLLDEQGWVLVSKIADFNRVKKMTTDIPLILDVLRSSSLIEVQDDKIRRRNDWSKWIP
PSVSSVSLEVQSPVSMERNISGISNECAGCQTTCCEQDEHLPSASNDSNMERSTELASAP
APEIEEKEPCNRCNCSANQNTVAAMFASNNTSVSFEHSQENVALSTSSDTEISKINGQSK
RRSDMPNLRSFSNDFMAESSGFSGDQSTFMLDEELELEQTSVRKGHSNKRVDDDEDQMDV
NDQDVHRLIIVTQDIRIDKDDITGLKETEPISTELASAINDGLYFYEQELQASRFSRRNS
SVTEMRDGDSKSCTFSSTSMNSKGNASIAGNNGSEENGPAITRRRQNKGNGKLHSSHKQR
LYPSNFRNHANSRNRYGIVSESPPSNSIGFFFGSTPPENYGQISSKLSGSPHGILCGSSP
PVGSMPKPFPPFQHPSHQLLEENEFKQQKYLKFHKRCLNDRKKLGIGCSEEMNTLYRFWS
YFLRDMFNKSMYNEFRKLALEDSAAKYNYGLECLFRFYSYGLEKNFKEDLYEDFEQLTFE
SYQNGNLYGLEKYWAFHHFRENRNSGKPLRKHPELDRLLREEYRSLEDFRAKEKAEKAAG
KESSISKASSSNEKERDHHVCGCSSSRGK
NT seq 2970 nt   +upstreamnt  +downstreamnt
atggagagcggaattccgccggaggcggcggcggcggttgacggcgtagcgccggaggtg
gaggaggctgccggcgatgcggggaggtcgtcgccgtggaggatgccgccggatacggcg
gctgcggctgctgcggaagcggagggctcggtgatgggggcagagtcttggccgacgcta
tcggatgcgaggccgaaggggcctgtgagtgctggcccgaaggtgtcggttgctgctgcg
ggcaatgttggtgcgggtcccaagaatgggccgccgccgccgcctcctgctcatgttccg
acgcagggttctgttggcttgcgcaaatctgatggatatggaagtggtaatccgcccaat
aagcatcatcaagtgcgtcctcacaaacatggggccaagcgtaaccttcctgcaaatggg
gcaccaccatttcctgtacctttgccctacaaccttcaggctgggcaaccgatgttttat
cctgttgtacagcctccacctttattcattcatgaatatgcctaccagactggccctatg
ccatttcagaacaatgatcctcacattgtgaaatctggaggtgaacctcctaggccacct
ttcattccaaatggacaagctggaggaaacaatggaaacagaatggtgccgcccccaaga
ggagacccaaatacttggcaccccagtcctggcaattctattagtagacctcataatgct
catgaacctgctaaccaatataaccaaacgtggtgcaaccagcgggcatttggtcctaga
catcacatgaatatgccacctggtatgggacctaggacatttgtcagaccaattccacac
tttgttggtcctgctgctggatacattaatagacctgctttccctggtaatggtattgct
cctatgtattacatgcctgccgctcctctagaaatgatgagaggtcctcctcgttttatt
acacagccttgccctccgacatatccaattttgacatccgaggaagtagaattgagaagt
aaaatagtaaaacaaattgagtattatttcagtgacgaaaatttgcagaaggacaactat
ttgatctcgttactggatgaacagggatgggttttggtatctaaaattgcagactttaac
agggtcaagaaaatgacaaccgacatacctttaattcttgatgtcctgcggagttcaagt
ttaatagaagttcaggatgacaaaataaggaggcgtaatgactggtcaaagtggattcca
ccttcagtatcatctgtttctttggaggtccaatctcctgtcagtatggaaaggaatata
agtggcatctctaatgagtgtgctggttgtcaaactacctgctgtgaacaagatgagcat
ttaccctcagcaagcaacgatagtaacatggagaggtctacagagctagcttctgcacca
gctccagaaattgaagaaaaagaaccttgtaatagatgtaactgttcagcaaaccaaaat
acagttgcagccatgtttgctagcaacaatacttctgtgagttttgagcattcacaggaa
aatgttgctctttccactagtagtgatactgaaattagtaaaataaatggacaatcaaag
aggagatccgacatgccaaatttacgaagtttttctaatgatttcatggctgagtcatct
ggcttcagtggggatcaaagcacatttatgcttgacgaggaactagaattggagcagaca
tctgttagaaaaggccattcaaataaaagggttgatgatgatgaagatcaaatggatgta
aatgaccaagatgtgcatagactaataattgtaacacaagatatcaggatagacaaagat
gatataactggcttgaaagaaacagaaccaatttcgactgagcttgcatctgctatcaat
gatggcctttacttttatgagcaggagttgcaagcttcacgcttcagccgaagaaatagt
tctgtgacagagatgagagatggagactctaaatcctgtaccttctcaagtacctctatg
aattcaaagggaaatgcctcaattgctggaaacaatggctctgaagagaatggaccagct
attactcgaaggcgacaaaataaaggcaatggcaagttgcattcctcacataaacagcgc
ttatatccaagtaattttagaaatcatgccaacagccgcaatcgttatggaattgtatcg
gaaagtccaccaagcaactcaatcggctttttctttgggtcaacgccccccgaaaattat
ggacaaatatcttcaaagctgagtggttctccccatggtattctttgtgggagcagtcca
cccgtgggatctatgccaaaacctttcccaccatttcagcatccaagtcatcagctttta
gaggaaaatgaatttaagcagcagaagtatctgaaatttcacaagcgttgccttaatgac
cgtaagaaattaggaattggttgcagtgaggaaatgaacacactttataggttttggtca
tacttcctgagagatatgttcaacaaatctatgtataatgaatttcggaagctagcactg
gaagattcagctgctaagtataattatggactcgagtgcctcttcagattttacagttat
gggttggagaagaactttaaagaagatttgtatgaagattttgagcagcttacgtttgag
tcctatcagaatggcaatctctatggccttgaaaaatactgggcatttcatcattttcga
gagaatcggaacagcggcaaacctctgaggaagcatccagagctggacaggctacttagg
gaggaataccgaagcttggaggatttcagagccaaggaaaaggcagagaaagcggcaggg
aaggagtcaagtattagcaaagctagcagctcaaatgagaaagagagagatcaccacgtc
tgtggctgtagttcttctcgtgggaagtag

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