KEGG   Typha angustifolia (narrow-leaf cattail): 140764713
Entry
140764713         CDS       T11061                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140764713
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140764713
   03041 Spliceosome [BR:tang03041]
    140764713
Messenger RNA biogenesis [BR:tang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     140764713
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     140764713
Spliceosome [BR:tang03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    140764713
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_11 Cut8 SCO2_C
Other DBs
NCBI-GeneID: 140764713
NCBI-ProteinID: XP_072959527
LinkDB
Position
8:15550477..15551952
AA seq 491 aa
MAKKRKLETKKEIEANSTHEEAPVEEPVEESTREEANDDGVEEVVKQETVPESESKPELP
DPSSSSSLDGNGATAASSAAAVVDSDEEDEDDSDPASIQKLLETFPKDQLVDILRDAVVR
HRDVLADVRRFADADPALRKIFVHGLGWDTNADTLAAAFREYGKIEDCKAVVDKLTGKSK
GYGFILFKRRSGARRALMQPQKRIGNRMTACQLASAGPAPPPAPAPPPVSEYTLRKIFVS
NVGADIDPQKLLQFFARYGEIEEGPLGLDKATGRPKGFALFVYKTVESARKALEEPHKNF
EGHTLHCQKAIDGPKPGKGGFHQGGAHGSHFGRNESSGFGGGMGSHIVGTAGTGHLMAPP
ATGLGFNQAAPPAAAAAAAAAGLNPALGQALTAILATQGQGLGLSNLLGSLGTSGVGSPA
VNHGVPSGGHGMHGVYGNQGPAVGNPGMLGGYGAAGAMQGGYGNVPTGQGGSGRNQQGLG
HLGGAGPYMGH
NT seq 1476 nt   +upstreamnt  +downstreamnt
atggctaagaagcgaaagctcgagactaagaaggagatcgaggccaattccacccatgaa
gaagccccggtggaagaacccgtcgaggaatccaccagggaggaagccaacgatgatggc
gttgaggaggtcgtcaagcaagaaacggtacccgagtccgagtccaaacctgaactcccc
gatccctcgtcctcctcctccctcgacggcaacggcgcaactgccgccagctcagccgcc
gccgtcgttgatagcgacgaggaggatgaggacgacagcgacccggcatcgatccagaag
ctccttgaaactttccccaaggaccagctcgttgacatcctccgcgacgcggtggtgcgc
caccgcgacgtcctcgcggacgtccgccggttcgccgacgccgaccccgccctccgcaag
atctttgtccacggcctcgggtgggacactaacgcggataccctcgccgccgccttccga
gagtacggcaagatcgaggactgtaaagccgtcgtcgacaagctcaccgggaaatccaag
ggctatggcttcatcctcttcaaacgccgctccggcgcacggcgagccctgatgcagccc
cagaagcgtatcgggaaccggatgaccgcgtgccagcttgcatcggcaggccctgcgccg
cccccggcccctgctccaccaccggtctcggagtataccctgcggaagatattcgtcagc
aacgtgggagccgacatcgacccgcaaaagcttctgcagttcttcgctcgatatggggaa
attgaggaggggccccttgggttggataaggctactgggaggccgaaaggtttcgccctt
ttcgtttacaagacggttgaaagtgccaggaaggctttggaggagccgcacaagaacttc
gaggggcataccttgcattgccagaaggcaattgatgggccgaagccgggaaagggcggg
ttccatcaaggcggagctcatgggtcgcactttggtaggaatgaaagttctgggtttggt
ggtggaatggggagtcatattgtaggaaccgctggaactgggcacttgatggcgcctccg
gctactggtttgggattcaaccaggcagcaccgccagctgcggcagcagcggcggctgca
gcagggttgaatccagcattggggcaggctctgactgcaatccttgctactcaagggcag
ggattggggttaagtaacctgctgggttcattggggactagtggagtggggtcgccggcg
gtcaaccatggtgttcccagtggaggacacgggatgcatggtgtttatggtaatcaagga
ccggctgtagggaaccctgggatgctaggaggctacggggctgcaggagcaatgcagggt
ggatatgggaatgtgccaacgggacagggaggatctgggaggaatcagcaaggacttgga
cacttgggtggtgcaggaccttacatgggtcactag

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