KEGG   Typha angustifolia (narrow-leaf cattail): 140764714
Entry
140764714         CDS       T11061                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140764714
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140764714
   03041 Spliceosome [BR:tang03041]
    140764714
Messenger RNA biogenesis [BR:tang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     140764714
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     140764714
Spliceosome [BR:tang03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    140764714
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM_2 FRQ Zip
Other DBs
NCBI-GeneID: 140764714
NCBI-ProteinID: XP_072959529
LinkDB
Position
8:complement(15537971..15539332)
AA seq 453 aa
MAKKRKPVPVPEPEPEPEPEPSSSEEEEIEEEEEEEEEEEEEEEEIEEAEVEEEEEVEEV
EEDASSSDEEEEEEDEEEKKEADDGKIDPLDRDAIRKLLEPFGKDQLVDLLAEAATRTPA
IYSRIFASSRSDPAHRNVFVHGLGWDTTTDALAAAFSPFGAIEECKVVSDRATGHCKGYG
FVLFRSAAAARGALKEPQKRIGGRLTSCQLASFGPPGAQGPVVEPTGRKLYVSNVPTHVS
PDRLRAFFAQFGEIEEGPLGGDRVTGNLRGFAIFVYKTMEACARALQEPKKVFDGCELQC
QRALEGLKPKNTAVPVSAPVIVPQANDLAMVYASQSLMGLNQAMNPAAAVGLLGQNAGIG
LLNPGVAAGLAGVSPLGRSTGPTPRPYGVGLGIGGGVSGINTISPSVIGNYGSQAALQGL
GAYQNNQLSSTAAVRSQAGIGSIGTSLPPYLGR
NT seq 1362 nt   +upstreamnt  +downstreamnt
atggcgaagaagcgaaagcccgtccctgtgcccgaacccgaaccagaacccgaacccgaa
ccgtcctcctccgaggaagaggaaattgaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaaattgaagaagcagaagttgaagaagaagaagaagttgaagaggta
gaagaagatgcttcctcctccgatgaagaggaggaggaggaagacgaagaagagaagaag
gaagctgacgacggaaagatcgaccccttggatcgcgacgcgatccggaagcttctcgag
cccttcgggaaggaccaattggtggatctcttagcggaggcggctacaaggaccccggcc
atctactctcggatcttcgcctcgtcaagatcagacccggcccaccgcaacgtgttcgtc
cacggcctcggttgggacaccaccaccgacgccctcgccgccgccttctcccccttcggc
gccatcgaggaatgcaaggtcgtctccgaccgcgccaccggccactgcaagggctacggc
tttgtcctcttccgctccgctgccgccgcccgcggcgccctcaaagaaccccagaagcgc
atcggcggccgcctcacctcatgccagttggcatccttcggcccacccggagcgcagggt
ccagtcgtggagcccacgggccgaaagctgtatgtcagcaatgtgccgacgcatgtgtcc
ccggaccgccttcgtgcgttcttcgcacaatttggtgagatcgaggaggggccacttggt
ggcgaccgcgttactgggaatctgcgaggtttcgcgatatttgtgtataagacgatggag
gcgtgcgctcgggctcttcaagagccgaagaaagtgtttgatgggtgtgaattgcagtgc
cagagggcgcttgaggggcttaagcctaagaacaccgccgtgccggtttctgcacctgtt
atagttccgcaggcgaatgaccttgcgatggtctatgcttcacagtcactaatgggcctc
aatcaggcgatgaatccggctgctgctgttggccttttaggtcagaatgcaggaattggg
ttgctgaatccaggggtagcagcagggttagcaggggtttctcctttgggaagaagtacg
gggcctacaccgcgtccttatggagttgggttagggataggtggaggtgtatcaggaatc
aatactattagccccagtgttattgggaattatggatcgcaagcagctttgcaaggatta
ggagcttaccagaataatcagttgtcttcaacagctgctgtgaggtctcaggctggtata
gggtctattgggactagcttgcctccttatcttggacgctag

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