Typha angustifolia (narrow-leaf cattail): 140764734
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Entry
140764734 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140764734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tang03036
]
140764734
Chromosome and associated proteins [BR:
tang03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
140764734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASXH
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
140764734
NCBI-ProteinID:
XP_072959566
LinkDB
All DBs
Position
8:complement(17048005..17051940)
Genome browser
AA seq
1311 aa
AA seq
DB search
MTVVKNSVRVSRLDGNSSPGSRWADEDEVQTASEESEALAASSDADSGMGSDEVDASELG
EAGEEIVQVGNQSCSMPLELYDLADLGSVLSLETWNNCLTEEERFALSALLPDMDKETFG
WTLKELFTGKNFHFGSPISTLFNQLKGGMCDPKIILYRQGLVFFQRHKHYHRLREYQNSM
VGSLIQIRDAWQNCAGYGIEERLRFLNIIRNQRSLGYEKDGDAEMETDLESDEDFGDQFR
QKRFKMGPGRPNYDKKENSKGVLRVAAQKASDQGYRAGVVPHSLAVKHGAETKGRAGYDL
GAVRRARHQMIVDGDILEEHGYEIGKQGDWNAAHGSEMFRAGLTKPGKKQEFMTRYKRGT
FRDDYLEGNAGSPYYQDKGRNADQAVTVASYDPQSFDTLKKKYPGREWTYHARGAQHQVV
KGNQMDWLSGNRPVRHNKVLEEVVSLDHSGKSDDWNIRRKKWKSADEYKSRKLKVDHSPN
VRSYKNISVKMDDSNFSSELKAKVLQGKIRGKYAQYDGMGLEYSRGANLFAQSEETESDS
SEQVEEGKAINTSTRRTEFYPYEVVKSVPDSKRANRLMDTDKVYARIPPVVEPYAKKGKH
KDSMIEPSYLSDIKLMKKGHALQTSENLQPSAVKSHTAEKKRKGMVHLDHSSRQANYVNV
YDRSMLDENGENLDGSSKSLNNERLKSRSAERVQVSVVHNSETDHHERSSMPLLGCNSAT
KKPKGKADASQLDESGESFYWQSSPVQQIDNTIIVRKKGKRKAGAGNDTSMMVSDLVIPE
KGTVDVEPVNLQKKPFTLITPTIHTGFSFSIIHLLSSVRKAMVTHIEDSTLENHLEKDSS
RLKLKKDERSRMHQVSTGTCLSQSHEKMDIDTAENTGQNNLPSLTLQEIVNRVRSNPGDP
CILETQEPLQDLVRGVLKIFSSKTAPLGAKGWKPLVSYEKSNKSWPWIGPLTSSSDNDTI
EEETSSEAWGLPHKMLVKLVDAFANWLKSGQETLQQIGSLPAPPASMLSNLDEKERFKDL
RAQKSLNTISPSSDEVKRYFRHEELLRYSVPDRAFSYTAADGKKSIVAPLRRGGGKPTSK
ARDHFMLKPDRPPHVTILCLVRDAAARLPGSIGTRADVCTLIRDSQYIVEDVSDAQVNQV
VSGALDRLHYERDPCVQFDADRKLWVYLHRDREEEDFEDDGTSSTKKWKRQRRDATDPLD
NVQATGDPAVGVSSAGYDCDTDLNVDLSSAREENSELVYNDMRPEMENMKSLNDTAPGNR
SSDNSGSWEPLQLNSLQENKMLCQENSTNEDFDDGSFSRERQLGLLSTSLL
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggtgaagaatagcgttagggtttcgagattagatggcaattcctccccgggg
agtcgatgggctgacgaagacgaagtccagacggcctcggaggaatctgaagctttggcg
gcatcttcggacgcggactctggcatgggatccgacgaggtcgacgcctcggagctcggg
gaggccggggaagagatcgtccaggtcgggaaccagagctgcagcatgccgctcgagttg
tacgatctggctgaccttggctcggtgctttcactcgagacctggaataattgcctcaca
gaggaggaaaggttcgcgctctcggcgttactcccggatatggacaaggaaacctttggg
tggaccctaaaggagctctttactgggaagaatttccatttcgggagtccaatttccact
cttttcaatcaattgaagggcgggatgtgtgaccccaagatcattctttatcgccagggt
ttggttttctttcagcggcacaagcactaccatcgccttcgagagtaccagaattcgatg
gtcggaagtcttattcagatcagggatgcctggcagaattgtgcaggttacgggatagaa
gagaggcttcgctttctgaatataatcagaaatcagaggtctctgggttatgagaaggat
ggtgatgcagagatggagactgacttggagagcgacgaggatttcggcgatcaattccgg
cagaaacggttcaagatgggtcctggacgacctaattatgataagaaagagaactcaaag
ggagtgttgagggttgctgctcagaaggcttctgatcaggggtatagagcaggggtcgtc
cctcactctttggctgtcaagcatggtgcggagactaaaggtagagcagggtatgatttg
ggagctgtccgaagagctagacatcagatgattgttgatggtgatattttggaggaacac
ggatatgagataggaaagcaaggagactggaatgcagcacatggaagtgaaatgttcagg
gcaggattgacgaagccaggaaagaaacaggaatttatgacaagatacaagagaggcaca
tttcgagatgactacctagaaggcaacgctgggtcaccctattaccaagataagggaaga
aatgccgatcaagcagtcactgtagcttcttatgatccccaatcttttgacactctgaag
aagaagtatccaggaagagaatggacatatcatgctagaggagctcagcatcaagtggtg
aaaggaaatcagatggactggttatctggtaatcgtcctgtccggcataataaagtgctc
gaagaagtagtctccctagatcattctggtaaatctgatgattggaacattagaaggaaa
aaatggaagagcgcagatgagtataaaagcaggaaactaaaagtcgaccacagtccaaat
gttaggtcgtacaaaaatatttcagtgaagatggatgactcaaatttctcttctgaactc
aaagcaaaagtattacaagggaagatcaggggtaaatatgctcaatatgatgggatgggc
ttggagtactccaggggtgctaatttgtttgctcaaagcgaggagacagaatctgattcg
tcagaacaagttgaggagggtaaagctattaatacttcaacaaggaggacagagttctat
ccatatgaagtagttaaatctgttcctgattccaaaagagccaacagacttatggacaca
gataaggtgtatgctcgtattcctccagttgtggaaccttatgctaagaaggggaagcat
aaagatagcatgattgagcctagttatttgtctgacattaaattgatgaagaaagggcat
gctctgcagactagtgaaaacttgcagccatcagcagtgaagagtcatactgcagagaag
aagcggaaaggtatggtgcatctggatcattcttcgcggcaagcaaactatgtgaatgtc
tatgacaggtccatgctggatgaaaacggggaaaatttggatggaagttccaaatcattg
aataatgagagactcaagagcagatcagcagaaagagtccaagtttctgttgttcacaat
agtgagacagatcatcatgaaaggtcaagtatgcccctgctaggatgcaactccgcgacg
aagaagccaaaaggaaaggctgatgcttcgcaattagatgagtcaggtgaatctttctac
tggcagtcaagtccagttcagcaaattgataacaccattatagtgaggaagaagggaaaa
aggaaagcaggtgctggaaatgacacctcaatgatggtgtctgatctggtcataccagaa
aagggaacagtggatgtggagcctgtgaacctgcagaagaagccatttacactaatcacg
cctacaattcacactggattttcattctccatcatacatcttctttcgtctgtccgtaag
gctatggttactcatattgaggatagcacactggaaaatcatcttgagaaggacagtagt
aggctgaagttgaagaaagatgagcggagcaggatgcatcaagtatcaactggtacatgc
ctatcccagtctcatgagaaaatggatatagatactgcagagaatacaggacaaaacaat
ttgccttctctcacacttcaggagattgtcaatcgagttagatcaaacccaggagatcca
tgtatccttgaaactcaggagccactccaggatttagtgcgaggagtgttgaaaatattt
tcatctaagactgcacctttaggagcaaagggatggaagccgcttgtgtcctacgagaag
tcaaacaaaagttggccatggattggtccactcacttctagttctgataatgatactatt
gaagaggaaacttcttctgaggcatggggtttacctcacaagatgcttgtgaagttggtt
gacgcatttgctaattggctaaaaagtggtcaagagacactacagcagataggaagcctt
ccagcacctcctgcctcaatgctttcaaacttagatgagaaggagagattcaaagatcta
agagctcagaaaagtctgaacactattagcccaagttctgatgaagtaaaaagatacttc
cgccatgaggaacttctcagatactcagttcctgacagggcattttcgtatactgccgcc
gatggtaaaaaatctattgttgctccccttagaagaggaggtggaaagccaacttcgaaa
gctcgggaccatttcatgcttaagcctgaccgcccaccacatgttactattctttgtctt
gtaagggatgcagcagccaggttgcctgggagtattggaacaagagcagatgtttgtaca
ctgataagggattcgcagtatattgtcgaagatgtctctgatgcacaagttaaccaggtt
gtcagtggggctttggatcgattgcattatgaacgtgatccatgtgtacagtttgatgct
gatagaaaattgtgggtttacctgcacagagatagagaggaagaagattttgaggatgat
ggcacctcatctactaaaaagtggaaaagacaaaggagagatgctacagatcctttggac
aatgtacaggcaactggagacccagctgttggtgtttcttctgctgggtatgattgtgat
actgatcttaatgttgatttatcatctgccagagaagagaactctgaacttgtttataat
gatatgaggccagaaatggagaacatgaaatcacttaatgacacagcaccaggcaacagg
agttctgacaactctggaagctgggagccgcttcagttgaattccttgcaggaaaataag
atgctatgtcaagagaactccaccaatgaagatttcgatgatgggtcatttagtagggag
aggcaacttgggctcttgagtacaagcttattgtga
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