Typha angustifolia (narrow-leaf cattail): 140764747
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Entry
140764747 CDS
T11061
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang00040
Pentose and glucuronate interconversions
tang01100
Metabolic pathways
Module
tang_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140764747
Enzymes [BR:
tang01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
140764747
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
140764747
NCBI-ProteinID:
XP_072959583
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Position
1:complement(join(3278833..3279054,3279153..3279381,3279489..3279778,3280035..3280454))
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AA seq
386 aa
AA seq
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MAQNMSVLLLLLLLSFAVTTHAAYNVVDFGAKPDGRTDAAKAFLSAWAAACGATKPAMVH
VPAGRFFVSQARFAGPCKNNKIRVFIDGTVVAPPGNNGVVEWIAFKYVDGLSIYGGTLDG
QGQSMWACKKAGRSCPIATTSLTIGLSKNVLVQGLTSLNSEGFHMSIFGSSGVTVKGAKF
LAPGDSPNTDGIHVQMSSFVNILSSTMKTGDDCISMGAGTSAVWIQGINCGPGHGISIGS
LGGLPQEPGVQNITVTSVVFSGTQNGLRIKTWGKPHVGYVKGVVFQHAVMNDVQNPIVVD
QNYCPGNINCPGQSSGIKISQVSFTDIRGSSATAVAVKFDCSPSNPCTGFGLRDIKLTYQ
KNKQAQSFCKNVKGSTSGVMNPPSCL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaaacatgagcgttcttcttctccttctcctcctctccttcgccgtaacaact
catgcagcctacaacgtcgtggactttggcgccaagcctgacggccggaccgacgcggcg
aaggccttcctcagcgcgtgggccgccgcttgcggggcaaccaagccggcgatggtccac
gtgccggccgggaggttcttcgtgagccaagcccgcttcgccggcccctgtaagaacaac
aagatcagggtgttcatcgacggcaccgtcgtcgcgccgccgggtaacaatggagtcgtc
gagtggatcgcgttcaagtacgtcgatggattgtccatctacggcggaaccttggacggg
caagggcagtccatgtgggcgtgcaagaaggctggccggagctgcccgatcgccaccacg
tcgttgacgattgggctatcgaagaacgtgctcgtccaagggttgacttccctcaacagc
gaaggattccacatgtcgatattcggcagctccggcgtgacggtgaagggggcgaagttc
ttggcccccggcgacagccccaacaccgacggcatccacgtccagatgtccagcttcgtc
aacatcctctcctcgacgatgaagaccggcgacgactgcatctccatgggcgccggcacc
tccgccgtctggatccagggcatcaactgtggccctggccatggcatcagcatcgggagc
ttgggagggttgccgcaggagcccggagtgcagaatataacggtgacgtccgtggtgttc
tcgggtacccagaacgggctaaggatcaagacgtgggggaaaccccacgttgggtacgtc
aagggggtagttttccaacacgccgtcatgaatgacgtccagaaccccatcgtcgttgac
cagaactactgccccggaaacatcaactgcccgggccagagctcgggaatcaagatcagc
caagtgtcgtttaccgacatccgaggatcatcggcgacggcagtcgccgttaagttcgac
tgcagcccgagcaacccctgcaccgggtttggtttaagggacataaagctgacgtaccag
aaaaacaagcaggcgcaatccttctgcaagaatgtgaagggatccacctctggtgtcatg
aaccctcccagttgcctctaa
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