KEGG   Typha angustifolia (narrow-leaf cattail): 140764773
Entry
140764773         CDS       T11061                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    140764773
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tang03400]
    140764773
DNA repair and recombination proteins [BR:tang03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     140764773
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 UBM
Other DBs
NCBI-GeneID: 140764773
NCBI-ProteinID: XP_072959619
LinkDB
Position
8:join(4600064..4600151,4600248..4600498,4600610..4600755,4600846..4600969,4601812..4601889,4602009..4602062,4602640..4602824,4603060..4604881,4605482..4605676,4605914..4605999,4608166..4608433,4608519..4608655,4609349..4609433,4609753..4610241,4610732..4611385)
AA seq 1553 aa
MGVQGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHLLGFFR
RICKLLFLRTKPVFVFDGATPALKRRTLASRRRHRDAARAKIRKTAEKLLLNHLKAKKLE
ELAEEIKNSRIKNDAKGKEVEGKGRDDSQGSGAANQESLDELLAASLAAEEETELSGREM
ASSAGAAFVEEGDDDDENEEMILPVTTQNIDPTVLASLPPSMQLDLLVQMRERVMAENRH
KYQKIKKAPARFSELQIQSYLKTVAFRREIDEVQRCAAGRGLGGVQTSKIASEANREFIY
SSSFTGDKQMLTTQVANDGDVDCDATKKQSSSNLLKHNLGSNFISGKEGPASELIRDFGS
DVETYHDESGHVRVSRVRALGIRMTRDIQRNLDFMKEYEQQESQGDISMVPGPNSSIEGL
DLPEGPSESNDPPSAFKINEDYTETISKIHRASVLEDGNSLNEFSSSGNKDTIEISFLED
QIEVKDTDDQLFLHLVSGTPTSNLFSEGVHLDLDSSKESDDFECLWEEGLVEEENGTAMD
CQKESQSSSAEKNRYKDGVGWEEGVCDFTEVGSHCQSAPEKVSKGLLEEEALLQEAIRRS
LEDLDGRMSESMRSEYINLEKCHNDQSSLVFDSSDLKHTESRGKTCIPSETNTMTSMPFN
IVDGIVQQTNSSRQDLLHAIELAVPGGQNDQQVSQLASSDRQGVLCAAGSPRERFSSSNI
SDADLTAELSIVNEGRVHKSIVTLDANKETPPVSIDGELSEEQQLSVTTRDAGNNSSLRI
LTENNICSNFKLSSEIKSNAAEHTIVNAHSDQISEQSEPFQRRYVDNYQQKDIVKGNFVV
NLDMQKEKLIKHDSGPSSPTIGKTTEHIDDHNGVLEDTLEKEISLLRKEQLDLGDEQRKL
ERNADSVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEMKNLVDGVVTDDSDVLLFG
ARNVYKNIFDDRKYVETYFMKDIESELGLTREKLIRMALLLGSDYTEGISGIGIVNAIEV
VHAFPEEDGLQKFREWVESPDPTILGKLDHHSGSNSKKRLLRSSNEMRSNMEGASEVSHD
DEPSVSGIQDIKESFMSKHRNVSKNWHIPSSFPSESVISAYILPQVDESTELFSWGKPDL
VLLQKLCWETFGWNKQKADELLVPVLKEYNKHETQLRLEAFYTFNERFAKIRSQRIKKAV
KGIIGNSSAGLADDIIQDCSQSRKKKCLSSSIQEKCSDGKTGNTTKATKTVRRGKRESKN
IESDNGVGESLGGNGGTEFNAAVGRVSGRRRVRSKGPVRDQGKPNLETATSTDHFEDKDV
EENDFTVTEAMAELRRSVRPRKQVKYAEVDWEEDYPNVNLNQKTQKELQQPALEQELAEK
DSRDGSQCLEGSNYFHIGDGSFLKESDLQGHEIEQTTSSINDFSVKADGDGCREASGLDN
GRGSPPMEFLKDYHFSGGGFCTDDGEGQDGTVVLPHAGPFEGSVELMKELQNVPDNNASL
HPVRSPGGDDLMTTSEVLDRPNSSIANTYASQEGSTKHGLSAMPSLRRKRRKS
NT seq 4662 nt   +upstreamnt  +downstreamnt
atgggagtgcagggtctctgggaactcctcgcccccgtcggtcgtcgcgtctccgtcgaa
accctagccgggaagaagctcgccatcgacgcgagcatatggatggttcagttcatgaag
gcgatgcgagacgagaagggggagatggtccgcaatgcccacctcctcggcttcttccgc
cgcatctgcaagctcctcttcctacgcaccaaacccgtgttcgtcttcgacggcgccacc
cctgccctcaagcgccgaaccctcgcctcccgccgccgccaccgcgacgccgcccgcgcc
aagatccgcaagactgccgagaagctcctcctcaaccatctcaaggcgaagaaacttgaa
gaattggcggaggaaattaagaatagcaggataaagaacgatgcaaaaggtaaggaggtc
gaaggcaaggggcgtgatgatagccaaggtagtggagctgccaaccaggaaagcctggat
gagctcctagctgcgtcgcttgctgcagaggaagaaacggaattatctggcagagaaatg
gcctcttctgcaggtgctgcttttgtggaagaaggggatgatgatgatgagaatgaagag
atgattttgccagtaacaacccagaatatagatccaacagtgttagcttctctgcctcca
tcgatgcaattggatcttcttgttcagatgagggagagagtcatggctgaaaacaggcat
aagtatcagaaaattaagaaggctcctgcaagattttctgagctacaaatacagtcatat
cttaaaactgttgctttccgtcgagagatagatgaggtgcagagatgtgctgctggaagg
ggtttagggggtgtccaaacttcaaaaattgcttctgaagctaatagagagttcatttat
tcatcatcatttactggcgataaacagatgctgacgacacaagttgctaatgatggagat
gtagattgtgatgcaactaagaagcaaagctcttcaaatttgttgaagcacaatctaggt
agtaactttatatctggtaaagagggtcctgctagtgaacttataagagattttggatct
gatgttgagacataccatgatgagagcggacatgttcgagtaagcagagtaagagcttta
gggattcgtatgactcgcgatatacaacgaaatttagacttcatgaaagagtatgaacag
caggaaagtcagggagatatctccatggttccaggacctaatagcagtatagaaggtctt
gatctccccgaaggtccttctgaaagtaatgaccctccgagtgcttttaaaattaatgaa
gattatactgaaaccattagcaaaatccatcgggcttcagtactggaagatggaaatagt
ttaaatgagttctcttcttctggaaacaaggataccatagaaatatctttcttagaagat
caaattgaggtaaaagatacagatgaccagctatttcttcatttagtttctggaactcca
acatcaaacttattttctgagggtgttcatttggatttggatagcagtaaggagtctgat
gattttgaatgcttatgggaggaaggtttggttgaggaagaaaatggaactgcaatggat
tgccaaaaggaatcccaatcatcttccgcagaaaagaacagatacaaagatggagtgggc
tgggaggaaggtgtttgcgattttactgaagttggttctcattgtcaaagtgcacctgaa
aaagtgtcaaaaggattgctggaggaagaagctcttctacaggaagcgataaggagaagt
ttagaggatcttgatggaaggatgtctgaaagtatgaggtcagaatatataaatttagag
aaatgtcacaatgatcaaagctctttagtgtttgattcgagtgatttaaaacatacagag
agcagaggcaagacatgtattccttcagagactaatactatgacaagtatgccatttaat
atagtggatggtattgtacaacaaactaattccagtaggcaggatcttctccatgccatt
gagttagctgttcctggtggacagaatgatcagcaggtgtctcaactggctagttctgat
agacaaggtgttctttgtgctgctggttctcctagggagcgtttttcctcatcaaacata
tctgatgctgacttaactgcagagctatctattgtaaatgaagggagagttcacaagagt
attgtgacattagatgcaaataaagagacacctccagtatctattgatggtgaactaagt
gaggaacagcaactatctgttactactagagatgctggaaataattctagtttgagaata
cttacagagaataatatttgttccaattttaagttgagttctgaaattaaaagtaatgca
gctgaacatactatagttaatgcccatagtgaccaaatttctgaacaaagtgagcccttt
caaagaagatatgttgacaactatcagcaaaaggacattgtgaagggcaattttgtggtt
aacctcgatatgcagaaagaaaagttgatcaagcatgatagtggtccttctagtcctacc
ataggaaaaacaacggaacacatagatgatcacaatggagtgttggaagatacattggag
aaggaaatctcacttctcaggaaagaacagctggatcttggagatgaacagagaaagcta
gagcgcaatgcagattctgtcagcagtgagatgtttgcggaatgtcaggagttgcttcaa
atgtttggcttgccatatataattgcacctatggaagcagaagctcagtgtgcatacatg
gaaatgaaaaaccttgttgatggtgttgttactgatgattctgatgtcctcttatttgga
gctcggaatgtttacaagaatatatttgatgatcgaaaatatgttgaaacatacttcatg
aaggacattgagagtgaacttgggttaactagagaaaagttaattcgcatggcattgctt
ttggggagcgattatacagaaggaatcagtggaattggaattgtcaatgccattgaggtt
gtacatgcttttcccgaggaagatggccttcagaagttcagagaatgggttgaatctcca
gatccaactatattaggaaaacttgatcatcattctggtagcaattcaaagaaaagattg
ttgagaagttcaaatgaaatgcgaagtaatatggaaggagcatctgaagtaagccatgat
gatgaaccatctgttagtggcatccaagacatcaaggagtccttcatgagtaagcataga
aatgtaagcaagaactggcacattccttcatcatttccaagtgagtcagttataagtgca
tacattttgccacaagttgacgagtcaacagagctattttcttggggaaagccagatttg
gttttacttcagaagttgtgttgggaaacatttgggtggaataaacagaaggctgatgaa
ctgcttgttccagttttgaaggagtataacaagcatgagacacagttgcggctggaggca
ttttatacattcaatgagagatttgctaaaatccgtagccagaggattaaaaaggctgtg
aaaggaattataggaaattcttctgctggtttggccgatgacattattcaagattgttct
caatccaggaaaaagaaatgcctaagctcttctatacaggagaaatgttctgatggaaaa
actggaaatacaacgaaagctacaaagacagtgcgaagagggaagagggagagcaaaaac
attgagtcagataatggagttggagagtcactcggaggaaatggcggaactgaatttaat
gctgccgtaggaagagtcagtggaaggagaagagtacgaagcaaggggccagtaagagat
caaggaaagcctaaccttgaaactgcaacttctactgatcactttgaagataaagatgta
gaggaaaatgacttcactgtgacagaagccatggcagaattgcgcaggtcggtgagaccg
cggaagcaggtcaaatatgctgaagtggattgggaagaagattatccaaatgttaatttg
aaccagaagacccaaaaagaacttcagcaacctgcattggagcaggagctggctgagaaa
gacagtagggatggaagtcaatgccttgagggaagcaactactttcacattggagatgga
tcttttctaaaagagagtgatttgcaaggtcatgagattgagcaaacgacaagctcaatc
aacgatttttctgtcaaagctgatggggacggctgtagagaggcttctggccttgataat
ggcagaggaagcccacccatggaatttttaaaagactaccattttagtggaggtggattc
tgcactgatgatggagaggggcaagatggtacagttgtcctgccacatgctgggccattt
gaaggttcggttgaactgatgaaagaattacaaaatgtaccagacaacaatgcaagtttg
cacccagtgagatctcctggaggagatgatcttatgacaacatccgaggttcttgatcga
cctaattcttcgattgcaaatacttacgcatctcaagaaggttctactaaacatggttta
agtgctatgccttcactaagacggaagagacggaagtcctga

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