KEGG   Typha angustifolia (narrow-leaf cattail): 140765249
Entry
140765249         CDS       T11061                                 
Name
(RefSeq) cell division cycle protein 48 homolog
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    140765249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140765249
   03009 Ribosome biogenesis [BR:tang03009]
    140765249
   04131 Membrane trafficking [BR:tang04131]
    140765249
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tang04147]
    140765249
Messenger RNA biogenesis [BR:tang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     140765249
Ribosome biogenesis [BR:tang03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    140765249
Membrane trafficking [BR:tang04131]
 SNARE
  SNARE associated proteins
   Others
    140765249
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    140765249
Exosome [BR:tang04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   140765249
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 CDC48_2 AAA_2 AAA_33 AAA_5 AAA_22 NPHP3_N AAA_14 TIP49 RNA_helicase AAA_17 AAA_28 nSTAND3 Mg_chelatase ATPase_2 AAA_18 Parvo_NS1 IstB_IS21 AAA_lid_PRS2_C ABC_tran Vps4_C AAA_7 NACHT Viral_helicase1 NB-ARC DUF815 TsaE AAA_24 Zeta_toxin KAP_NTPase Zot
Other DBs
NCBI-GeneID: 140765249
NCBI-ProteinID: XP_072960331
LinkDB
Position
8:join(1961397..1961431,1961545..1961707,1962080..1962308,1963118..1963884,1963987..1964208,1964306..1964377,1964463..1964744,1964830..1965189,1965380..1965679)
AA seq 809 aa
MANQGEASSSDPKGKKDYSTAILERKKAPNRLIVDEAINDDNSVVSMHPETMEKLQLFRG
DTILLKGKKRKDTICIVLADDSCEEPKIRMNKVVRKNLRVRLADVVSVHQCQDVKYGKRV
HILPIDDTIEGITGNLFDAFLKPYFLEAYRPVRKGDLFLIRGGMRSVEFKVIETDPAEYC
IVAPETEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEK
NAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKARSHVIVIGATNRPNSIDP
ALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGSDLAALC
TEAALQCIREKMDIIDLEDETIDAEVLNSMAVTNEHFKTALGTSNPSALRETVVEVPNVS
WDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGG
AADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRYQ
IFKACLRKSPVAKDVDLKALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSE
NPEAMEEDESDEVSEIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFS
EQAEAGAGATQSDPFASAAAPNDDDDLYS
NT seq 2430 nt   +upstreamnt  +downstreamnt
atggcgaaccaaggcgaagcatcctcttctgatccgaaagggaagaaggactacagcacg
gcgattcttgagaggaagaaggctcctaatcgtctgatcgttgacgaggccattaacgat
gacaactcggtcgtctcgatgcatccggagacgatggagaagttgcagctttttcgtgga
gatactatcctattgaagggcaagaagcggaaggacacgatttgcattgtgctagctgat
gattcttgtgaggaacctaagattagaatgaacaaggtcgtcaggaagaatctcagagta
aggctggctgatgtggtatcagtccatcaatgccaggatgtgaagtatgggaagcgagtg
cacatattgcctattgatgataccatcgagggaattacagggaacttgtttgatgccttc
ttgaagccatacttccttgaggcatatcgtccagtgaggaaaggggatcttttccttatt
aggggtggaatgagaagtgtggaattcaaggtcattgaaactgaccctgctgaatattgc
attgtagcccctgagacagaaatattttgcgagggggagcctgtgaaaagggaggatgaa
gagagacttgatgaagtgggctatgacgatgtgggtggagtaaggaagcagatggcccag
atcagagaattggtagaacttccgcttaggcaccctcaactttttaaatctattggtgtg
aagccaccaaaggggatcttgctgtatggaccccctggttctgggaagacactaatagct
agagcagttgctaatgagacgggtgcatttttcttctgcatcaatggtcctgagattatg
tccaagctagctggagaaagtgagagcaatcttaggaaggcatttgaagaagcagagaaa
aatgcaccatcaatcattttcattgatgagcttgattcaatagctcctaagcgagaaaag
acccacggagaagttgagaggcgcatagtttctcaactattgactctaatggacgggttg
aaggcccgctcacatgttattgttataggtgctacaaataggccaaacagtatcgaccca
gctcttagaaggtttgggaggtttgacagggaaattgacattggtgtgccagatgaagtt
ggacgcctggaggtccttcgcattcacactaagaacatgaagctggctgaagatgttgac
ttagaaagaatcgctaaagacacacatggctacgttgggtctgatctggctgcgctttgt
actgaagctgccctgcaatgcatacgtgaaaagatggatatcatagatttagaggatgaa
acaatagatgccgaggtgctcaactctatggcagttacaaatgaacacttcaagactgct
cttggaaccagcaatccttctgctcttcgtgaaactgttgttgaagttccaaatgtcagc
tgggatgatatcggtgggcttgagaatgtcaagagagagctgcaggagacagttcaatat
ccagttgagcatcctgagaaatttgagaagtttggaatgtctccatctaaaggagtcttg
ttctacggaccccctggttgtgggaaaaccttgttggctaaggcaattgcaaatgaatgc
caggcaaatttcattagtgttaagggtcctgaactgctaacaatgtggtttggtgagagt
gaagcaaatgttcgagaaatctttgacaaggctcgtcagtctgcaccatgtgtcctcttc
ttcgatgagcttgattcaattgctacacagagggggagcagtgtcggtgatgcagggggt
gctgctgatcgggttctgaaccagctccttacagagatggatggcatgactgccaagaaa
acagtcttcatcattggggcaaccaacaggcctgacattatagatccagcattgcttcgg
ccgggtcgtcttgaccagttaatatatattccattacctgatgaggattctaggtatcaa
atcttcaaagcttgcttgagaaagtccccagtggccaaagatgttgatctgaaggctctt
gctaagtacacacaaggatttagtggtgccgatatcacagagatctgccagcgtgcttgc
aagtatgccatcagagagaacattgaaaaggatattgagagggagaggaggaggagcgag
aaccctgaagcaatggaagaagacgagtcagatgaagtttccgagatcaaagctgtccat
tttgaagagtcaatgaagtatgctcgccggagtgtcagtgatgcagatattagaaaatat
caggcttttgcacagactttgcaacagtcaagggggtttggtactgaattccgcttctca
gaacaggccgaagcaggagctggtgccactcaatctgacccttttgcatccgcagctgct
ccaaatgatgatgacgatttatacagttag

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