Typha angustifolia (narrow-leaf cattail): 140765267
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Entry
140765267 CDS
T11061
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang00040
Pentose and glucuronate interconversions
tang01100
Metabolic pathways
Module
tang_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140765267
Enzymes [BR:
tang01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
140765267
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
140765267
NCBI-ProteinID:
XP_072960359
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Position
1:complement(join(3283568..3283786,3283903..3284131,3284205..3284494,3284597..3285022))
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AA seq
387 aa
AA seq
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MVQKMSILLLLLFLFFSFFTATHAAYNVLDFGAKPDGRTDAKKAFLKAWAAACGAAKPAM
VHVPSGRYFVSQAIFLGPCKNNKIRVFIDGTILAPTGNNRDTQWITFKYVDGLSIYGGTL
DGRGQSMWACKRARRSCPIATTSFTIGQSKNVLVQGLTSLNSEGFHMSIYASSGVTVKRA
KFLAPRDSPNTDGIHIQMSSYVNIVSSIMRTGDDCISMGAGTSAVWIEDIKCGPGHGISI
GSLGGLPKEPGVQNITVSKVVFSGTQNGLRIKTWGKPHDGYVKGVVFRHAVMNNVQYPIV
VDQNYCPGNINCPGQSSGIKISQVSYTNIRGSSATPVAVKFDCSPRNPCIGIGLRDIKLT
YKNKPAQSFCKNVKGSTSGVMNPPSCL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaaaagatgagcattcttcttcttcttctctttctcttcttctccttcttcaca
gcaactcatgcagcttacaacgtcttggacttcggcgccaagcccgacggccggaccgac
gcgaagaaggccttccttaaagcatgggccgccgcgtgcggagccgccaagccggcgatg
gtccacgtgccgtccgggaggtacttcgtaagccaggcgatcttcctcggcccatgcaag
aacaacaagatcagggtgttcatcgacggcaccatcctcgcgccgacgggaaacaacaga
gacacgcagtggatcacgttcaagtatgtcgacggcttgtccatctacggcggcaccctc
gacgggcgagggcagtccatgtgggcctgcaagagagcccgccggagctgccccattgcc
actacgtccttcacgattggccaatccaagaatgtgctcgtacaagggctgacgtcactc
aacagcgagggattccacatgtcgatatacgcaagctccggcgtgacggtaaagagggcg
aagttcttggccccccgcgacagccccaacaccgacggcatccacatccagatgtcgagc
tacgtcaacatcgtcagctcgatcatgaggaccggcgacgactgcatctccatgggcgcc
ggcacctccgccgtctggatcgaggacatcaaatgcggccctggccacggtatcagcatt
gggagcttgggggggttgccgaaggagcccggggtgcaaaatataacggtgagcaaggtg
gtgttctcgggtacacagaacgggctaaggatcaagacgtgggggaaaccccatgatggg
tacgttaagggggtcgttttccgacacgccgtcatgaataacgtccaatatcccatcgtc
gttgaccagaactactgcccaggaaacatcaactgcccgggtcagagctccggaatcaag
atcagccaagtgtcgtacaccaacatccggggatcgtcggcaacgcccgtcgccgtaaag
ttcgactgcagtccgagaaacccgtgcatcgggatcggtttacgggacataaagctcacc
tacaagaacaagccggcacagtcattctgcaagaatgtcaagggatccacctctggggtg
atgaaccctcccagttgcctctaa
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