Typha angustifolia (narrow-leaf cattail): 140765314
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Entry
140765314 CDS
T11061
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140765314
04121 Ubiquitin system [BR:
tang04121
]
140765314
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140765314
Membrane trafficking [BR:
tang04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
140765314
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140765314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
HypA
zf-C3HC4_3
DUF5316
Zn_ribbon_PF0610
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
140765314
NCBI-ProteinID:
XP_072960438
LinkDB
All DBs
Position
8:15723137..15724165
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AA seq
342 aa
AA seq
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MDESLAARYWCHMCSQMVSPAMEVEIKCPHCDSGFVEEMGGRGDIDATDLGSGRALSLWA
PILLGMMGGSSRRRRSHREEEEEDQEQDRDLETILRRRRRRSSAILQLLHALREGNRLLD
TENSESETEHERERERDHVILINSFNQAILLQGSFDGNQSQNQDSNSGSGIALGDYFLGS
GLDLLLQHLAENDPNRQGTPPAKKEAVDAMPTVKINEATSCSVCLEDFVIGEEAREMPCK
HKFHSSCILPWLELHSSCPVCRFQMPADESKGSNGVGSGNRMEGAGDNSNGNSEGNGRRF
WVPVPWPFNGLFSLSGSLSNGNSSSTQPSSSPSGSNSQPNDN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatccttagctgcaaggtattggtgccatatgtgctcacagatggtgtcccca
gcgatggaagtggagatcaaatgccctcattgtgacagtggctttgtggaagaaatgggt
ggtagaggtgatatagatgccactgatctgggatccggtcgagccctctctttatgggct
ccgatcctactcggtatgatggggggctcatcacgacggcggaggtctcatagggaagag
gaagaagaagaccaggagcaagaccgtgatttggaaacaattcttcgcaggaggaggagg
aggagctcagccattcttcaattgctgcatgcactgcgcgaggggaatagattactggac
actgaaaattctgagagcgagaccgagcacgagagggagagggagagggatcatgtaatt
ctaattaattctttcaaccaagctatacttctccaaggatcctttgatggcaaccagagt
caaaaccaagattcaaattctggctctggcattgcactaggggactacttccttgggtct
ggtctcgatctgctactgcagcatttggcggagaatgatccaaaccgacaaggaacaccg
ccagctaagaaagaggcagtggatgcaatgcctactgtaaagatcaatgaggctacaagc
tgctcagtttgtttggaagattttgtaatcggcgaagaggctagggagatgccctgtaag
cataaattccatagctcatgtatattaccatggctggagttgcatagttcatgcccagtt
tgtagatttcagatgcctgcagatgaatcaaagggttcaaatggagttggtagtggcaat
agaatggaaggtgctggagataatagtaatggaaatagtgaaggaaatggaaggcgattc
tgggtgcctgtgccatggccttttaatgggttgttctccttgtctggttctctaagcaat
ggcaactcttcttcaacacagccatcttcatctccttctggaagtaactctcaacctaat
gacaattga
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