Typha angustifolia (narrow-leaf cattail): 140765320
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Entry
140765320 CDS
T11061
Name
(RefSeq) transcription factor HY5-like isoform X1
KO
K16241
transcription factor HY5
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
140765320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tang03000
]
140765320
Transcription factors [BR:
tang03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
140765320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
Phlebovirus_NSM
FmiP_Thoc5
Uso1_p115_C
GAS
bZIP_Maf
DUF5113
DUF4407
MscS_TM
DUF2207_C
TSC22
DUF3563
GIT_CC
APG6_N
Cmr2_hel_dom2
Spc24
Motif
Other DBs
NCBI-GeneID:
140765320
NCBI-ProteinID:
XP_072960447
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All DBs
Position
8:join(14587913..14587994,14588293..14588464,14588557..14588839,14588921..14588992)
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AA seq
202 aa
AA seq
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MQEQATSSLPSSSERSSSSAPQTEVKEGMESDDDIRRVPEFRLELAGPSSSGREVGSGAG
PDQAQTGQRRRARNPADKENKRLKRLLRNRVSAQQARERKKAYLTDLEARAKDLERNNSE
LEEKLSALQNENQMLRQVVTLIKLAIYFIPLVVCYYIFDAMQCMHDSNRHKLNATYLLKI
LKNTTVSRRGTSSSASGEGAVG
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaacaagcaacgagctcgcttccttccagcagcgagagatcgtcgagctcggct
cctcaaacggaagtcaaagaaggaatggagagtgacgacgatataaggagggtaccggaa
ttccggctcgagttggccggaccgtcatcttccgggcgggaggtcggttcgggagccgga
ccggaccaagcccagactgggcagaggaggagggcaaggaacccagcggacaaagagaac
aagcgactcaaaaggttgttgaggaatagagtgtcggcccagcaagcaagggagaggaag
aaggcttatctgactgatttggaggcaagagccaaggatttggagaggaacaactcggag
ctggaggagaagctctccgcgttgcagaatgagaaccagatgcttagacaagtagtaact
ctaattaagctcgccatatactttattcccctcgttgtttgctattatatctttgatgca
atgcaatgcatgcatgatagcaacagacataaattaaatgcaacatatttattaaagata
ctgaagaatactactgtaagcaggagaggaacaagtagcagtgccagtggagaaggggca
gtaggataa
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