Typha angustifolia (narrow-leaf cattail): 140765329
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Entry
140765329 CDS
T11061
Name
(RefSeq) syntaxin-81
KO
K08492
syntaxin 18
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04130
SNARE interactions in vesicular transport
tang04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
140765329
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
140765329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140765329
Membrane trafficking [BR:
tang04131
]
SNARE
Syntaxin (Qa)
Stx-rER
140765329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
DUF5886
DUF6331
DUF7824
YscO-like
Motif
Other DBs
NCBI-GeneID:
140765329
NCBI-ProteinID:
XP_072960462
LinkDB
All DBs
Position
8:complement(join(17682724..17682867,17683267..17683398,17683481..17683720,17684669..17684818,17685282..17685386,17685513..17685596,17685723..17685800))
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AA seq
310 aa
AA seq
DB search
MSRIRDRVEDFKDAVRVAAISYGYTESQLAATMASFIMHRPTHRSAFLRSAIKTLENIKQ
LEIFIVKHRKDYVDLHRTTEQERDNIEHEVGVFVKTCKDQIDILKNRIYDEENKANTRTW
LHMRDDNSDADMVAHKHGVVLILSERLHSVTAQFDHLRSLRFQDAINRRMPRRKVQRIPE
SKSSEASKSDFPKLEDQELSAGPIRIQDQLLDDETRALQVELTNLLDAVQETETKMVEMS
ALNHLMSTHVLQQAQQIEHLYEQAVEATNNVERGNKELSQAITRNSSSRTFLLLFLFVLT
FSILFLDWYS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaatcagggatagggtagaagatttcaaggatgcggttcgcgttgcagctatc
tcctatggctacaccgagtcccaattggctgcaacaatggcatcttttatcatgcacaga
ccaacgcataggtcggccttcctaagatcggcaatcaagacgcttgaaaacatcaagcag
ttggagattttcattgtaaagcatcggaaagattatgtggatttgcatcgcaccacggaa
caagagagggacaacattgagcacgaagttggtgtttttgtaaaaacatgcaaggaccag
attgatattcttaagaatagaatatatgatgaagaaaataaggcaaatacaagaacatgg
cttcacatgagggatgataattctgatgcagatatggtagctcacaagcatggcgtggtt
ttaattctgagtgagcgcctccactcggttactgcacaatttgaccatctcagatcccta
cggtttcaagatgctattaacagaagaatgccaagaagaaaggtgcagagaatacctgaa
agcaaatcctcagaagcctctaaatctgattttcctaagcttgaagatcaagagctatct
gcggggcccatcagaattcaggatcaacttctggatgatgaaacacgagctcttcaggtt
gagttgacaaatctccttgacgctgttcaagaaacagaaactaagatggtggagatgtca
gctctgaatcatctcatgtcaacacatgtcttgcaacaggctcaacagattgagcatttg
tatgaacaggcagtcgaagctacaaacaatgtggagcgaggaaacaaggagctgtctcag
gcaatcacacgtaacagcagtagcagaacattccttttgctcttcctatttgtccttact
ttctcaattctgtttctggactggtatagctaa
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