KEGG   Typha angustifolia (narrow-leaf cattail): 140765528
Entry
140765528         CDS       T11061                                 
Name
(RefSeq) B-type cell cycle switch protein ccs52B-like
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    140765528
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tang04121]
    140765528
Ubiquitin system [BR:tang04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     140765528
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML EIF3I ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N MIOS_WD40 Aldo_ket_red Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_WDR41 WD40_RFWD3 Ge1_WD40 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 140765528
NCBI-ProteinID: XP_072960767
LinkDB
Position
8:complement(join(17474968..17475021,17475113..17475181,17475360..17475422,17475668..17475769,17475863..17476057,17476152..17476214,17476382..17476561,17476853..17476957,17477066..17477188,17477322..17477771))
AA seq 467 aa
MDSRKTRLNLPVGMETSLRLDTITTCFPAMPKTPSPSKTTYSDRFIPCRSSSRLQNFNLV
EKSSPAKEGGNEAYSRLLRAELFGPDSVPCSPGGQGSPMSPNKNLFRFKTDHSTPSSPFS
GLASSQDGGLLNEVSTPPKAPRKIPKTPHKVLDAPSLQDDFYLNLVDWSSQNVLAVGLGT
CVYLWSATTSKVTKLCDLGPRDGVCSVQWTREGSYLSIGTSLGEVQIWDGSRCKRIRNMG
GHQTRTGVLAWNSCILSSGSRDKNILQHDIRVPNDFISKFIGHRSEVCGLKWSHDDRELA
SGGNDNQLLVWNQRSQHPVLKLTEHTAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTAN
GNMLNFMDTGSQVCNLAWCKNVNELVSTHGYSQNQIMVWKYPSMGKVATLTGHTLRVLYL
SMSPDGQTIVTGAGDETLRFWNIFPSTKAQAPVRDSGVWSLGRTHIR
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggattcgaggaaaacccgattgaatcttccggtggggatggagacttctctccgtctc
gatacgatcacgacttgcttcccggcaatgccgaagacgccgtcgccctcgaaaacgacg
tacagtgatcgattcatcccctgcagatcgtcgtcgaggcttcagaacttcaacttggtg
gagaaatcgtcaccagccaaggaaggtggtaacgaggcttactcgagattgctccgtgcc
gagctcttcgggcccgattccgtgccgtgttctccgggaggtcagggctcgccgatgagc
ccgaacaagaacttgttccgcttcaagacggatcactccaccccgagctcgccgttttcc
ggattagcctctagccaggacggcgggcttctaaacgaagtctcgactccgcctaaggcc
ccgaggaagatacccaagacgccccataaggttcttgatgcaccatctcttcaagatgat
ttctatttgaacttggtagattggtcctcgcaaaatgtattggctgttgggttgggcact
tgtgtttatctttggtcagcaacaacaagcaaggtgacaaaattatgcgacttgggccct
cgagatggtgtatgttctgttcaatggactcgagagggctcctatctgtcaatcggaacg
agtctcggagaagtacagatttgggatggatcccggtgcaaaaggattcgaaacatggga
ggtcatcagacaagaactggagtcctggcttggaattcatgcattctatcttctggaagt
agagacaaaaatattcttcagcacgatattcgtgtcccaaatgacttcatcagcaagttc
ataggtcacagatctgaggtctgtggattaaagtggtcgcatgacgaccgcgaactcgca
tctggcggtaacgacaaccagctcttagtttggaaccaacgttctcagcatccagtcttg
aaacttactgagcatacagctgcagtcaaagccattgcctggtcacctcaccagcatggc
cttcttgcatcaggaggtggaacagccgatcgatgtatccgcttctggaacactgcaaat
ggcaatatgcttaatttcatggacacagggagtcaggtgtgcaatctagcatggtgcaaa
aatgtgaacgaattagtcagcactcatggttattcccaaaaccaaattatggtgtggaaa
tatccatccatggggaaggtagcaacattaactgggcatacacttcgggtactctacctc
tcaatgtcacctgatgggcagaccatagtaaccggtgctggagatgagactctgagattt
tggaacatcttcccttccacaaaagcacaggctcctgttcgcgattctggagtctggtcc
ttgggacgaactcacattcggtga

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