Typha angustifolia (narrow-leaf cattail): 140765552
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Entry
140765552 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K13210
far upstream element-binding protein
Organism
tang
Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tang03019
]
140765552
03041 Spliceosome [BR:
tang03041
]
140765552
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
140765552
Spliceosome [BR:
tang03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
140765552
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
140765552
NCBI-ProteinID:
XP_072960795
LinkDB
All DBs
Position
8:join(13833620..13833944,13834523..13834629,13834736..13834921,13834998..13835093,13835190..13835261,13835898..13836014,13839520..13840779)
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AA seq
720 aa
AA seq
DB search
MADELSYSSRSDHKRKFEDPAAGAPPARRPTGFSAPIASPSPDKSSVTAPPASYNNVPPP
VDGIQLAKQRAQEIAARLFSDAEAKRPRAENGGGADDSSDTGYGSSGSDYLQKPPSQPIS
ITPSAFPTYGYQGSSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSQ
TRTVELIGTSEQVSKAEQLINDVLSEAEAGGSGIATARRFSGPQVGAEQFQMKVANDKVG
LIIGKGGETIKNMQAKSGARIQVIPLHLPPGDTSSERTVYIDGTSDQIEAAKQLVNEVIS
VNRVRNPMAGGYPHQGFRPPRPPTNWGPPGAPPMQQPGYGYMQPGSYPGAPPQYMSQPPY
GSYPPPASGGFQSGWDQSSNPPAQQAAPGSGYDYYNQQQPQQQSQSVAGSSAPTDNTSYN
YGQTPNYNAQSSYGDSAYSQSSAGQQGYGQDSYSAAYQNPGSQQGYSQPVPAPQTGYDQQ
GYSTAPVYGTIANPTQDGSATTYGSQGGPAQASPAQQAPPVPASQGGYAGQPPITSTASY
SAPGTAQSGYGLTPTQPSYASQTPSQAGYGHSAPLTQPSYGQPPTGQKLPPAQAVYGQGQ
QPVSTQAGYVQPAPVQPGYSHGQPPSQAGYAQDSTHRPPPSGFASGAPQTGYGQQQAYGG
ATPTSQPSYGQQQQPYSDSYGSSSYSQPPAYSNDNATHAAYDQSAAAPTVPSGVTKTSPS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaactctcctactcttctcgatcggaccacaagaggaagttcgaggatcct
gccgctggagctccgccggctcgccgtccaacggggttttcggcaccgatcgcgtcgcct
tcgccggacaagagctcggtaacggcgccgccggcgtcgtacaacaacgtgccgccgccg
gtagatgggatccagcttgcgaagcagcgtgcgcaggagattgccgcgcggctcttcagc
gacgccgaggcgaagcggcccagggccgagaacggaggcggtgctgatgattctagtgat
acgggttacggctcttccggaagtgattacttgcagaagccccctagtcagccaattagc
atcacaccctcagcatttccgacatatgggtatcagggttcaagtaaaaagattgatata
ccaaatggaagggttggtgttatcattgggaaaggtggagagacaataaaatatcttcaa
cttcagtcaggagctaaaattcaagtgactagggatatggatgcagatccaaattctcag
actagaacagtagaacttattggcacgtctgaacaagttagcaaggctgagcagttaatt
aatgatgttctttctgaggctgaagctggaggatctggtattgctactgctcgaagattc
agtggtccccaagtcggtgcagaacagtttcaaatgaaagttgctaacgacaaggttggt
ctgatcataggcaaaggtggtgagactattaaaaatatgcaagctaagtctggtgcccgc
attcaggtgatacctttgcatctgcctcctggcgacacttcaagtgaaaggacagtttat
atagatgggacatcagatcaaattgaggcagcaaaacagttggtgaatgaagtcatcagt
gtgaaccgtgtcaggaatccaatggctgggggatatcctcaccaaggattccgtcctcct
cggcctccaacaaattggggtccacctggagcacccccaatgcaacaacctggttatggt
tacatgcaacctggatcttatcctggagcaccgcctcagtatatgtcccaacctccttat
ggtagttaccctccaccagcatctggcggtttccagtctggttgggaccaatcatccaat
ccaccagctcagcaagctgctcccggatctggatatgattactataatcaacaacaacca
cagcagcagtcacaatctgttgcaggatcttctgctcccaccgataataccagctataat
tatggtcaaactcctaattataatgcccagagttcctatggggactctgcctattcccag
tcatctgctgggcaacagggttatggacaggacagttactctgctgcttatcagaaccca
gggtcccaacaaggttattctcagcctgtgccagctccccagactggctatgatcaacaa
ggttacagcactgcacctgtttatgggacaattgctaacccgacacaggatggatcagct
accacttatggttcccaaggtgggcctgcacaagcttcacctgctcagcaagctcctcca
gttcctgcaagccaaggaggatatgcaggtcaaccacccattacctctacagcaagttat
tctgccccaggaactgcacagtctggatatggcttgacaccaactcaaccttcttatgcg
agccagactccatctcaagctggatatgggcattcagctccattgactcagcctagttat
gggcaacctcctactggccagaagttgcctcctgctcaggctgtttatggacagggtcaa
cagcctgtatctactcaggctggctatgttcagcctgctccagtgcaaccgggatattct
catggtcaaccaccttctcaagcaggatatgctcaagattctactcatcggccaccgcct
tctggttttgcatctggagcacctcagacaggttatgggcagcagcaagcttatggtggt
gcaactcccacaagccagccaagttatggtcaacaacaacagccgtatagtgactcttat
ggtagcagcagctactcacagcctcctgcatattctaatgataatgctactcatgctgcc
tatgatcaatctgccgctgcacccaccgttcccagtggagtgaccaaaacttctccaagt
tga
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