Typha angustifolia (narrow-leaf cattail): 140765906
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Entry
140765906 CDS
T11061
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 4 isoform X1
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tang01009
]
140765906
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tang03021
]
140765906
Enzymes [BR:
tang01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
140765906
Protein phosphatases and associated proteins [BR:
tang01009
]
HAD phosphatases
Fcp/Scp phosphatases
140765906
Transcription machinery [BR:
tang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
140765906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
Herpes_UL49_5
Motif
Other DBs
NCBI-GeneID:
140765906
NCBI-ProteinID:
XP_072961312
LinkDB
All DBs
Position
8:join(4476867..4477024,4478163..4478248,4480941..4481074,4482213..4482393,4483408..4483697,4484575..4484763,4485014..4485052,4485450..4485761)
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AA seq
462 aa
AA seq
DB search
MSLAAESPSLSSSSSDDFAAILDAELEFDSSEPFPDDDETNSVEEDDELHEQRNKKRKVE
DFESSDELQERVMLEKNLEKTGTSTESEHPTDICPPHPGFFRGLCMRCGQLEEDDGSGVA
FGYIHKDLKLGATEMDRLRGADLKKLLREKKLILILDLDHTLLNSTRLVDVSIEEDYLIR
QADSTKDDPGRSLFRLDSIHMLTKLRPFIHDFLREASSMFDMYVYTMAERSYALEMVKLL
DPGNVYFNSKVISQSDCTQRHQKGLDVVLGAESVAVILDDTEFVWQKHKENLIQMERYHF
FSSSCRQFGFSIKSLSESMKDEMESDGALATILNVLKKSHQRFFDPELGIDLSSRDVRQV
MKKIRQEILQGCKIVFSRVFPYKSRAEDQSIWKMAEQLGATCSTDVDSSVTHVVAMDSGT
EKARWAVQNKKFLVSPSWIEAANYRWNRQKEEDFTISTPRNN
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgagtttggctgcggaatccccatccctctcctcgagcagcagcgacgatttcgccgca
atcctcgacgccgagttggaatttgattcgtcggaaccttttcctgacgacgatgagacc
aacagcgttgaggaagatgatgaactccacgagcagaggaataagaaacgtaaagttgag
gattttgagagttcggatgagctgcaggagagagtgatgttggagaaaaacctagaaaag
actggtacatctacagagtcagaacatccaactgatatatgccctccacatcctggattt
tttagaggattgtgcatgagatgtgggcagcttgaggaagatgatggatcaggagttgct
tttggttacattcataaggatttaaagttaggtgctacagagatggatagactacgcgga
gctgatctgaagaaattgttgcgtgagaaaaagctcatacttatattagacttggatcat
actctactgaactcaacccgtcttgtagatgtttctattgaagaagattatttaattagg
caagctgattcaacaaaagatgatcccggcagaagcttattcagactggactccattcat
atgctgacaaagttgaggccttttatccacgactttttgagagaagcaagtagtatgttt
gatatgtatgtgtacactatggcagagcgatcgtatgccctggaaatggtcaagcttctt
gaccctgggaatgtctacttcaattcaaaagtaatctcacagtctgattgcacccagcga
catcagaagggccttgatgtggtgctgggtgctgaaagtgttgcagtgattcttgacgac
acagagtttgtgtggcagaagcacaaagaaaacctaatccagatggaaagataccatttc
ttttcttctagttgtcgccagtttggcttttcaattaaatcattgtcagagtcaatgaaa
gacgaaatggagtctgacggtgcacttgcaacaattttaaatgttctaaagaagtctcat
cagaggttttttgatccggaacttggaatagatctctcatccagagatgtgcgacaggta
atgaagaaaatccgccaggaaatattacaagggtgtaaaatagttttcagccgggtgttc
ccatacaagtctcgtgccgaggatcagtcaatctggaagatggctgagcaattaggagca
acatgtagtactgatgtggattcatctgtcacacatgttgttgcaatggattcaggaaca
gagaaggcacgctgggctgtgcaaaacaagaagttcttagtcagccctagctggattgaa
gcagcaaactaccgatggaatcggcaaaaggaggaagactttacgatcagcactcctaga
aacaattga
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