Typha angustifolia (narrow-leaf cattail): 140766227
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Entry
140766227 CDS
T11061
Name
(RefSeq) nuclear ribonuclease Z isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tang03016
]
140766227
Enzymes [BR:
tang01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
140766227
Transfer RNA biogenesis [BR:
tang03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
140766227
Prokaryotic type
140766227
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
140766227
NCBI-ProteinID:
XP_072961803
LinkDB
All DBs
Position
8:join(14186309..14186521,14187290..14187452,14187538..14187608,14187708..14187812,14187984..14188097,14188869..14188937,14189045..14189119,14189906..14189980)
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AA seq
294 aa
AA seq
DB search
MEKRSKEPSSSKGKRGVLEIEGYPIEGLSIGGQETCVIFPTLKMAFDIGRCPQRSIAQDF
LFISHGHLDHIGGLPMYVATRGLYSMKPPTIFVPASLKENVEKLFDIHRAMDQSLLNHNL
IVLNVGEEFQIRKDLKVKAFKTYHVIPSQLLQGYIIYTVKQKLKQEYVGLSGNEIKTLRL
SGVEITNTVTSPEIAFTGDTTSDFITDPDNTDILKARILVMESTFVDDAMPIEHARDFGH
THLFEIENYSEMFQNKAILLIHFSARYRPEEIEAALAKLPPSIANRVFALTEGF
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaggagcaaagagccatcgtcgtcgaagggaaagagaggtgtactagagatc
gaagggtacccaatagaggggttatcgatcggagggcaagagacgtgtgtgatattcccg
acactcaagatggccttcgacattgggaggtgcccccagagatccatcgcccaggatttc
ctcttcatctctcacggccacctcgatcacatcggaggtcttcccatgtatgttgccaca
cgtgggttgtatagcatgaaaccaccaactatatttgttccagcatctttgaaagaaaac
gtggaaaaactatttgacatacacagggcaatggaccaatctttgttgaaccataatcta
atagtgttgaatgtaggtgaagaatttcagataaggaaggatcttaaagtaaaagccttc
aaaacttaccatgtgataccaagtcagttgttgcagggttatataatatacacagttaag
cagaaactaaagcaggaatatgttggcctttctggaaacgagatcaagaccttaaggtta
tcaggtgtggagatcactaacacggtgacgagtcctgaaattgctttcacgggagatacc
acatccgattttataactgatcctgataacactgacatactaaaagcacggattcttgtc
atggagagcacttttgttgatgatgcaatgccaattgagcatgcaagagattttggccac
actcatttgtttgagatagaaaattattctgagatgttccaaaacaaagccattcttcta
attcatttttctgctcgttatcggcctgaggaaattgaggcagcgttggctaaattacct
ccatctatagcaaatagagttttcgcgttgacagaaggtttttga
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