KEGG   Typha angustifolia (narrow-leaf cattail): 140766532
Entry
140766532         CDS       T11061                                 
Name
(RefSeq) coatomer subunit alpha-1-like
  KO
K05236  coatomer subunit alpha
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tang04131]
    140766532
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tang04147]
    140766532
Membrane trafficking [BR:tang04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    140766532
Exosome [BR:tang04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   140766532
  Exosomal proteins of bladder cancer cells
   140766532
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_1st TPR_COPA_B Beta-prop_EML_2 EIF3I WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_SPT8 WD40_RFWD3 Beta-prop_Aladin NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st Fis1_TPR_C ENTH WD_LRWD1 Zn_ribbon_19
Other DBs
NCBI-GeneID: 140766532
NCBI-ProteinID: XP_072962023
LinkDB
Position
9:join(1297772..1297979,1298442..1298936,1299248..1302201)
AA seq 1218 aa
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHDEYPWIVSSSDDQTIRIW
NWQSRNCIAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGVLRKKTVSPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE
VDTLRGHMNNVSCVLFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILAAHP
ELNLLAAGHDSGTIVFKLERERPAFCVSGDTVYYVKERFLRFYEFTSQKDNQVVPIRRPG
SVTLNQGPRSLSYSPTENAVLICSDVDGGSYELYIVPKESVGRADYMQEAKKGAGGSAVF
VARNRFAVLDKSTNQALVKNLKNEIVKKTDLPIPTDAIFYAGTGNLLCRAEDKVVIFDLQ
QRIILGEIQAPSVKYVVWSSDMESVALLSKHAIVVANKKLVHRCTLHETIRVKSGAWDEN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVLIYITKVSGNNIYCLDRDGKNRVISIDASEYI
FKLALLRKRYDHVMSMIKNSQLCGQAVIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASAKEIDEKDHWYRLGIEALRQGNTSIVEYAYQRTKNFDRLSFLYLVTGNMEKLSK
MLRIAEIKNDVMGQFHNAMYLGDIRERVNILENAGHLPLAYVTAATHGLTEVADRLAVEL
GDNVPSLPKGKARSLLLPPAPLICNGDWPLLRVMQGIFEGGLDSLGRAGHDEEEEVTGAE
WGDEELDINDIGGVMQNGDLVGEAEYGDANEENEEEGGWELEDLELPPELDTPKAAGNAR
STSFVVPTAGMPVSQIWIQKSSLAGEHIAAGNFDTAMRLLGRQLGIRNFAPFKPLFMDLY
MGCQTYLSAFATAPVISIAVEKGWNESASPNVRRPPALVFKFSQMDDQLRAAYRATTEGK
FPEALRQFLNILHTIPLIVVDSRSEVDEVKELIEIAREYVLGLKIEVKRKELKDDVVRQQ
ELAAYFTNCKLQKIHTRLVLTSAMTICFKGGNYATAANFARMLLENSPNEIQAKKARQVL
QACGDKKDANQLNYDYRNPFIVCGATFVPIYRGQKDVACPYCASRFVPAFEGQLCTVCEL
AEVGADASGLLCSPSQIR
NT seq 3657 nt   +upstreamnt  +downstreamnt
atgctgaccaagtttgaaacaaagagtaatcgggtcaagggcttaagcttccacagcaag
cggccatggatcctcgccagtctccacagcggtgtcatccagctatgggattaccgtatg
ggaaccctcatcgaccgcttcgatgagcacgatggccccgtccgtggcgtccacttccac
aaatcgcagcccctcttcgtttccggaggagatgattataagatcaaggtctggaattat
aagacacaccgttgcctatttactcttcttgggcaccttgattatatccgtacagtccaa
tttcatgacgagtacccgtggatcgtcagttctagtgatgaccagactattaggatctgg
aactggcagtcacgcaactgtattgctgtgctaactgggcacaaccattatgtcatgtgc
gcgtctttccatccgaaggaggacctggttgtatcagcttctttggatcagacagttcga
gtctgggatattggggtgctgaggaagaagactgtctcacctgctgatgatattttgcgt
ctgagccagatgaatacggatctgtttgggggagttgatgctgttgtcaagtatgtattg
gaaggtcatgatcgtggagtcaactgggcatcctttcatcccacattgcctcttattgtg
tccggggcagatgatcgtcaagtaaagatatggcgaatgaatgatacaaaggcttgggaa
gttgataccttgaggggtcatatgaataacgtgtcttgtgtattgttccacgcaaagcag
gatattattgtatccaactcagaggataaaagcattcgcatatgggatgctacaaaacgc
acgggcatccagacatttcggagggaacatgatcgtttctggattcttgcagcacatccg
gaattgaatcttcttgcagctggtcatgatagtggcacaatcgtctttaaattggagaga
gaacgccctgctttctgtgtgagtggtgatacagtgtactatgtgaaagagcggttttta
cggttctatgaatttacatcccaaaaggataaccaagtggttccaataagaaggcctgga
tctgtcaccttgaatcaaggacccagatcattgtcctatagccccactgagaatgccgtc
ttgatctgctctgatgttgatgggggatcttatgaactctatattgttcctaaggaatct
gtcggaagagctgattacatgcaggaagcgaagaagggagcggggggttcagctgttttt
gtagctcgcaataggtttgcggttctggataagagcaccaatcaagcattagtgaagaat
ctcaagaatgaaattgtgaagaaaactgatcttcctattcctactgatgcaatattttat
gctggaacagggaacttgttgtgcagggctgaggacaaagtggttatatttgatcttcag
caaagaatcattcttggtgagattcaagccccttctgttaagtatgtagtttggtcaagt
gacatggagtctgttgcccttctgagtaaacatgctatagttgttgctaataagaaactt
gtgcatcgttgcacactgcacgagactattcgtgtaaaaagtggtgcttgggatgagaat
ggtgtcttcatttacacaactttgaaccatatcaagtattgccttcctaatggggacagt
gggattataagaactcttgatgttcttatttacataaccaaggtttctggaaacaatatc
tattgcttggatcgtgatggaaagaacagggtgatatcaattgatgcttcagagtatatt
ttcaagcttgcccttctccggaaaagatatgaccatgtgatgagtatgatcaagaactcg
cagctatgtggacaagctgtgatagcttatttgcaacaaaaaggatttcctgaagtcgct
ctccattttgtcaaagatgagagaacccgatttaacctggcactcgagagtgggaacatc
cagattgccgttgcgtctgccaaggagatagatgagaaagaccactggtataggttgggc
attgaagctctccggcagggaaacaccagtatcgtagaatatgcataccagaggacgaag
aactttgataggctgtcttttctctatcttgtaacaggaaacatggaaaaactatccaag
atgctgaggatagctgagattaagaatgatgtgatgggccagttccataatgccatgtat
ctaggtgacattcgagaacgagtcaatattttggagaatgctggtcatctgcctcttgca
tatgtcacagctgctacccatggactgacagaagttgctgataggcttgctgttgaattg
ggagataatgttccctccctaccaaaagggaaagcacgttctcttctgctgccccctgca
ccactcatctgcaatggggattggccattattaagggtgatgcagggtattttcgaaggc
ggactggacagtctagggagggcaggacatgatgaggaagaagaggttactggtgctgaa
tggggtgacgaggaactggatattaatgatatagggggtgtaatgcagaacggtgattta
gttggagaagctgaatatggcgatgcaaatgaagagaatgaggaggaaggaggatgggaa
cttgaagatttagagttacccccagagttagacacaccaaaggctgcaggtaatgcccgt
tctacttcatttgttgtccctacagcaggcatgcctgtaagccaaatctggatccagaag
tcctcccttgccggggagcatattgcggctggtaattttgacactgctatgcgccttctt
ggccgacagttgggtattaggaactttgcccccttcaagcccttgtttatggatctttac
atgggctgtcagacatatctgtctgcttttgcaacagctcccgtgatatctattgctgtt
gagaagggatggaatgagtcagccagtcctaatgtgaggaggccgcctgcacttgtcttc
aagttctcacagatggatgatcagctcagagcagcttatcgagccacgactgagggaaaa
tttccagaggctttgcggcagtttcttaatatcttgcacactatcccacttattgtggtg
gactctagaagtgaagttgatgaagtgaaggaactgattgagatagcaagggagtatgtg
cttggtttaaagattgaagttaaaagaaaggaactaaaagacgatgtagtgcgtcagcag
gagttggcagcttactttaccaattgtaaacttcagaagatacatacaagactcgtgctc
acaagtgctatgactatctgcttcaagggtggtaactatgccacagcagccaattttgcc
aggatgcttctggaaaacagcccaaatgagatccaagcaaagaaggctagacaggtgctg
caggcttgtggtgataagaaagatgctaaccagctgaattatgattacaggaatccattc
attgtttgtggggcaacctttgttccaatctaccgaggccagaaggacgtggcctgccca
tactgtgcctctcgattcgttcctgcctttgaagggcagctatgtactgtatgtgaactt
gcagaggttggggctgatgcatcaggtcttctttgttctccatcacagataagataa

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