Typha angustifolia (narrow-leaf cattail): 140766719
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Entry
140766719 CDS
T11061
Name
(RefSeq) E3 ubiquitin-protein ligase AIRP2-like isoform X1
KO
K25840
E3 ubiquitin-protein ligase AIRP2 [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140766719
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140766719
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140766719
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
RING_XB3-XBAT31
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-RING_4
zf-rbx1
MTNAP1_ZnF
zf-C3HC4_4
zf-RING_14
Motif
Other DBs
NCBI-GeneID:
140766719
NCBI-ProteinID:
XP_072962395
LinkDB
All DBs
Position
9:complement(join(3578615..3578825,3579286..3579550,3579626..3579692,3579811..3579961,3581015..3581094))
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AA seq
257 aa
AA seq
DB search
MLLGSMRKSFKDSLKVLEADIQHANTLASEFPREYDGACLQMRLSYSPAAHLFLFLVQWT
DCNLAGSLGLLRILIYMVYVDGTTTMSTHERKATIREFYAFGSYVVCLWAAVIFPSLLQL
QRGITDMEDKKQKEVCMERYTRKDDEMKQLSDIDAEREEECGICMEMNSKIVLPNCTHAM
CLDCYHDWNSRSHSCPFCRNSLKRVNSGDLWVYTDARDVVDTATVSRENLRRLFLYINKL
PLIIPDIVFDAYDSHVK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgttgctaggatcgatgcggaagtcgttcaaggattcgctcaaagtgctggaagctgac
atccagcacgcgaacactttggcttcagaatttccaagggaatatgatggtgcatgtctt
cagatgcggttatcatatagtcctgctgcacacttgttcctttttctggtgcaatggaca
gactgtaacctagctgggtctcttggtttattgagaattctcatttatatggtctatgtt
gatgggacaaccactatgtcaactcatgaaaggaaagcaaccattagagagttctatgct
tttggttcttatgtggtgtgcttgtgggcagctgtaatttttccctctctgttgcaacta
caaagagggatcactgatatggaggataagaagcagaaagaagtatgcatggaaaggtac
acgaggaaagatgatgaaatgaagcagttatcagatatagatgctgagagggaagaagaa
tgtggaatatgcatggagatgaacagcaagattgtgttgcccaactgcacgcatgccatg
tgcttggactgctaccatgactggaactcaagatcacactcatgccccttctgtcgtaac
agcttgaagagagttaactcgggtgatttatgggtatatactgatgccagagatgttgtg
gacactgcaactgtgtcgagagaaaatcttaggcgcctgttcttgtacataaataagctg
cctctgatcattccagatattgtttttgatgcctatgactctcatgtcaaatga
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