KEGG   Typha angustifolia (narrow-leaf cattail): 140766729
Entry
140766729         CDS       T11061                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tang04812]
    140766729
Cytoskeleton proteins [BR:tang04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     140766729
SSDB
Motif
Pfam: Beta-prop_WDR5 Katanin_con80 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_WDR41 eIF2A Beta-prop_VPS8 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_ACSF4 Beta-prop_IP5PC_F Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 140766729
NCBI-ProteinID: XP_072962408
LinkDB
Position
9:join(3726658..3726685,3726963..3727093,3727211..3727328,3727422..3727648,3727905..3728007,3729427..3729497,3729698..3729772,3729841..3729984,3730059..3730176,3730292..3731230,3732229..3732344,3733845..3733970,3734901..3734975,3735055..3735167,3736654..3736770,3736851..3736919,3737072..3737135)
AA seq 877 aa
MATKRAYKLQEFVAHASNVNCLKIAKKTSRVLLTGGEDHKVNLWAIGKPNAILSLLGHTS
PVESVSFDSSEILVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCISIDFHPFGEFFASGS
LDTNLKIWDIRRKGCIHTYKGHTRGVSVLRFTPDGRWVVSGGEDNTVKIWDLTAGKLLTD
FKVHEGQIQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSSGPETSGVRSMTFNSDGR
TLFCGLHESLKVLSWEPIRCHDVVDVGWSRLSDLNVHEGKLLGCSYNQTCVGIWVVDLSL
VEPYSVRSAEEKSNASINAPTQTDVKSSLGRLSISKDSASGSSSGVPQRIGSSSGSRTSP
NRSSFTMFKRNSSKTQGTTNVQNANKSDAIRASSPRISSRLEATADCRKESADVAPSAVP
RTRSKVDLSTNPAKEADVVVPPRTSSSGDVSNKEISTVAPVIVPRISSRVSISANPRKAA
SHVIPVIVPRTSTSSRADLAANPIGPTSSVIPFILPRTGSGVDLAADPRNITADIAPNIL
ITNLRVDQATDSGRDNGGGVALPYAMRSKGANLQRRDDSKGETTPTSSSSMDSENVEYVE
DDDQYTKSVVDGVKNPLPANEANMKPVKFNRTGKFGANRLMEPSQNYDVGYGRTRLRVAS
WERNEMVPINEGPVRSYSSEAMPAADITFSREGSSFAGKDTVSAGDEDVISGIMEQHLKV
LRTWQFRLTKLQVVHRLWEKNDMRGIVNAMQRMSDHAVSADVVSVLMEKSDIITLDICTF
LLPIITSILESRFDRHLTIALEMLLKLVKTFGPVISSTLSAAPSVGVDLQAEQRLERCNL
CFIELEKLKSSLPSTIRHGGSIGKLAQELQLTLQEVF
NT seq 2634 nt   +upstreamnt  +downstreamnt
atggcaaccaagcgcgcgtacaagctccaggagtttgtagcgcatgcttccaatgtcaat
tgtctcaagatcgcaaagaagacttcgagggttctcctcaccggtggggaggatcacaag
gttaatctttgggctataggcaagccaaatgccatattgagcctattgggccatacaagt
ccagttgagtcagtgagctttgattcttctgaaattcttgtggccgctggagcggcaagt
ggcactataaaattatgggacctggaggaggcgaaagttgttcgcactctcacagggcac
aggtccaattgtatatcaatcgacttccatccgtttggggaattctttgcatctggttca
ttggatactaacctaaagatatgggatattcgaagaaagggatgcattcacacatacaag
ggtcacactcgtggagttagtgtgcttagattcacccctgatggtcggtgggttgtttct
ggtggggaggacaacacggtgaagatctgggatttgactgctgggaagctcttgactgac
ttcaaagttcacgagggtcagattcagtgtatagatttccaccctcatgagtttctactg
gcgacaggttcagctgataagactgttaaattttgggacctggagactttcgaactgatt
ggatcatctgggcctgagaccagtggtgttcgctctatgactttcaacagtgatggaaga
acactgttttgtggattacatgaaagcttgaaggttctctcttgggaaccaataagatgt
catgatgtggtcgatgtgggatggtctaggttatcagatctaaatgtccacgaggggaag
cttcttgggtgctcatacaaccaaacttgtgtaggaatatgggttgtcgacttgtcgctt
gttgagccatactcagttaggagtgccgaagaaaaatctaatgcaagcattaatgcgccc
acacaaactgatgtaaagtctagcttgggaagattatccatttcgaaagattcagctagt
ggtagttcttctggtgttccccagagaattggatcaagctctggttcaaggacaagtccc
aacagatcttcttttacaatgttcaagaggaattcatcaaagacccaaggaacaaccaat
gttcagaatgccaacaagtctgatgccatccgtgccagttcccctagaattagttcaaga
ttggaagcaactgctgattgtagaaaagaaagtgctgatgttgcaccttctgctgtcccc
agaactagatctaaagtggacctttctaccaatcctgcaaaagaagctgatgttgtggta
ccccctagaactagctcaagtggggatgtgagtaataaagaaatctctactgtggcacct
gtcattgttccaagaattagctcaagagtcagtatttctgccaatcctagaaaagcagca
agccatgtaataccagtcattgtcccaagaactagtactagctcgagggcggatctggct
gctaatccaatcggaccaactagtagtgtgataccttttattttaccaagaactggttca
ggagtggatctggctgcagatcctagaaacataactgctgatattgcacctaacatcctc
ataactaacttaagagtggatcaggcaactgactctggaagagataatggtggtggagta
gcactaccatatgcaatgcggtcaaaaggtgctaatctacaaagaagagatgattcaaag
ggagaaactacccccactagttctagttctatggacagtgagaatgttgaatacgttgaa
gatgatgatcaatatactaaatctgttgttgatggtgttaaaaatccattacctgccaat
gaagcaaacatgaagcctgttaaattcaataggacagggaagtttggagcaaatagattg
atggaaccaagccaaaattacgatgttggctatggaagaacaagattacgagttgcaagc
tgggaaaggaatgaaatggttcctataaatgaagggccagtaagaagttattcctctgaa
gcaatgccagctgctgacatcactttttcgagagaaggctcttcatttgctggaaaagat
acagtatctgctggtgacgaggatgttatttctggtataatggaacaacacttaaaagtc
ctgagaacatggcagttccgtttaacgaaattacaggtggttcaccggctttgggaaaag
aatgatatgcggggtatcgttaatgcaatgcaaaggatgtcggatcatgctgtctctgct
gacgtagttagtgtattgatggaaaagagcgatattatcacactagacatttgcactttt
cttctaccaatcatcacaagcattcttgaaagcaggtttgacaggcatctgaccattgcc
ttggagatgctgctcaagcttgttaaaacctttggtcctgtgatcagctcaactttgtca
gctgctccatcagttggtgtagatcttcaggcagaacagaggttggagcgatgcaattta
tgctttattgaactggaaaaattaaagtctagtctcccttctaccatacgacatggaggc
tctatagggaagttggcacaggagttacagcttactctccaggaggttttctga

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