Typha angustifolia (narrow-leaf cattail): 140766810
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Entry
140766810 CDS
T11061
Name
(RefSeq) thioredoxin-like protein YLS8 isoform X1
KO
K12859
U5 snRNP protein, DIM1 family
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140766810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tang03041
]
140766810
Spliceosome [BR:
tang03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
140766810
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DIM1
Thioredoxin
Thioredoxin_7
DUF3192
Motif
Other DBs
NCBI-GeneID:
140766810
NCBI-ProteinID:
XP_072962566
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Position
9:complement(join(3982078..3982386,3984135..3984254))
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AA seq
142 aa
AA seq
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MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWAMKDKQEFVDIVETVY
RGARKGRGLVIAPKDYSTKYRY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccttcttcctcatctccactcaggatgggcggtggaccaggcgatcctggcg
gaggaggagcgcctcgtcgtcatccgattcggccacgactgggacgagacttgcatgcag
atggatgaggtgctagcatctgtagcagagactataaagaattttgcggtgatatacctt
gttgatattaccgaggttcctgatttcaataccatgtacgagctgtacgatccatcaaca
gtgatgttcttctttcgtaacaagcacatcatgattgatcttggcactgggaacaacaac
aagatcaactgggcaatgaaagataagcaggaatttgttgacattgtggagaccgtctac
aggggggccaggaaaggtcgtggtctggttatagcccccaaggattactctaccaaatat
cgctactaa
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