Typha angustifolia (narrow-leaf cattail): 140766848
Help
Entry
140766848 CDS
T11061
Name
(RefSeq) uncharacterized protein isoform X1
KO
K24155
rabconnectin-3a
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
140766848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140766848
Membrane trafficking [BR:
tang04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
140766848
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
140766848
RAVE complex
140766848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
140766848
NCBI-ProteinID:
XP_072962611
LinkDB
All DBs
Position
1:join(90602..91013,92349..95030,96303..96729,97114..97342,97680..97844,98770..99042,99204..99449,99733..100098,100224..101576,101800..101856,102577..103014,103312..103535,103626..103759,104388..104645,104736..104914,105007..105093)
Genome browser
AA seq
2509 aa
AA seq
DB search
MPPAEEGRVSGEEAGRENISDLLPLGLVRAQLIPPSPNRRESAIDFLPDFGGASWIAYGA
ASLLVISHFPSPLSSHEIKVGPLFRQVIEMPPPSDATAAASVNAVSWCPAIPSEGEIAAA
AGSCIWMYSPVPARDGSGSFCWKQAATIVETFIVDTIEWTGSGDGLIVAGVDVVLWVRKE
TSWEMTWRSRAKVPQVLVSATWLAEGPVATGAHAVAHCNGTNPAAASSLSGEEYKHVFVY
LSDEKSGLTKIQLCHPQPVSMIQWRPFARAQSEKDASHVWRNVLLTCCLDGTVRLWSENE
IGRSRKIGKDAHDQRNTRRSFNVIAVIEINKCSKGMLGKDIFVKWAIEFGGVISKGEGDR
YDLWPSDFEQHQVGKCEWLIGIESNFSVTFWAIHCLDDVSPARFPRVTLWRKQHLMDLKT
SVINYDSSNSEGQPIFIKVVASRRLCFGSPDVCSLLQLLPDNSIIWSMLYSPILDCTDDV
VSSKNITEKCLFSFAGEVLNQDGHTGTIRQVCVHPYSCEIEIAASLDSDGLLLLWSISTF
STFTWNLQTALHPLWRLLGRIYLRDLSTDSGYSCLSWAPSILDDNRFLLLGSENGIDCFI
IRVPGTGENVLCQKILTIPYGVGKNGEGPPDHVFSTPVTSNCGKSLLSSSFLLFCIWKKK
FQALSWKVVLHSGDPNEGYCGCGFDAKSILFEGKMYFAKVYLGSSVFPSPQESDQTTSSA
IVSMNKSVISVEQYVSSYNGSGNSSPSYHLVTGCFDGTLKLWKMSCEENAFHSEKEILCW
DLVGMFTAHQGAVTSISLSSCGFKIASASTSPQTNITSLHVWEPVCLMGGGSFLFEDAII
LQDTVVGLSWVSLGNGQLLLGVCLPNELRIYCHRRPSGQNLVHSKKSKEMHFWNYIAVAH
SYPVIKEFFWAPKVTPVLVHEKHFSLFSQWQFRTDLKDSVDHSITYSAAVGEYFPSITNI
EGTNIYKAGSSKGSNNGKNGCADCSSCPVTSNQHNDPNFMNRLFNLMDIVDRLGGPLAVY
HPQALIQHLYSGNWKRAQIVLQHLAESIRTSETSTTNMECTGFGESGHIIPEIHLSDYFM
DTTSTNFSYKGLQWGENSTTRVSDFHFHANVLHDVASQKSEVTGFAHTLNKCLDVAAITD
IERMQILVIVDLLVEISDLSRASAYKTLDEPGRRFWVAVEFQRRYFLRKFGNSAAAEGFL
VDSASVAWALQSDCQDDLLKSLLSLEPTWPEMRNLGIGLWYTNVTQLRTKMEKLARLQYL
KNKDPKECALLYLALNRRQVLASLFKISKDEKDKPLFGFLSRNFQEEKNKAAALKNAYVL
MGRHQLELAVAFFLLGNDPSSAVTVCAKNLGDEQLALIICRLVEGYGGPLEHHLISNVLL
PNAIEKEDYWLSSILEWTLGNFSQSVQKLFDSQYKTQISQSAAMGNHAVCSDPKIGQYCV
YLSTKNNFKNSVGDALAAKLSKLSTSLVASALKRIGLPLEALECLSSSLSIDTKDQGSSL
HVGDQIFHKILNPFPGAAPNWLSRDVAANFELNAKLNMASEYMSHLLIGHPQWPDVGLTR
EVSHKEHDDLQIGGLKHDVEIAISVLRKKFSLKLLDLAGMILVFACNKGFPFLAYLLFHA
NRSPENEADNCGLDASSSTSSYTLFRLLLKANEEICYFVARYVVSCHFTDSTLKLVCNRN
FTFENDYNEKVCLPKLTYLLRSSRSILKHYNGGIFANKNTLSIFAVLDLLEYSVEFAFTW
LQKDVKGLIMMIAPILDASVNSSTFLVIIDELMKVLHKKCHDASRNGVKYIPDDYFSERQ
LKNSEDSMPPIDEKWHLIGASLWIHLLTFMKNHLDNILVIEKLQDESTKMNKDLTNMFPF
HVIDLLVNSLNCVTSSLIKQFASFIRHKISKNILSSTLFWLDEYNYSQSGSLNHFQDLRL
SSLLLSGNEDKESLFSLLWKISVSPQDICASLANESVNYFPHNGQKLSMSWKDMEKSASV
DYEIGASENSRAENEFSSTSPSYGTGRRFIGRASEADDLLETRRKHPSAEKETSYFHNPR
ELMKRNGELFEAICFNSINEHQVAVASNKKGLLFLNWNGEQHFKRQTEFAEYIWSECDWP
QDGWAGSESTPIPTYVSPGIGLGSKRGAHLGLGGATTGLGSLARPRRDLMGGGAFGIPGY
AGIGASGLGWGEQEDFEEYVDPPATVENVHSRALSHHPTRPFFLVGSSNTHVYLWEFGKD
RALATYGVLPAANVPPPYALASVSSLQFDYYGHRFATAALDGTICTWQLEVGGRSNIHPL
DSSLCFNNHASDVAYVSGSGSILAAAGCSSNGANVVIWDTLAPPPTCQASVFCHEGGARS
LSVFDNDIGSGSISPLIVTGGKNGDVGLHDFRYIATGKTKRHKNCNELDLKSTVIHDTTY
GAPNIGDSSNGMLWYIPKAHLGSVTRISTIPNTSLFLTGSKDGDVKLWDARRSQLVFHWQ
KLHDRHTFFQPNSRGFGGVVRAAVTDIQVLSHGFLTCGGDGSVKLIELQ
NT seq
7530 nt
NT seq
+upstream
nt +downstream
nt
atgccaccggcagaggagggccgggtctccggcgaggaggccggcagggagaatatctcc
gatcttctcccccttggtctcgtccgagcccagctgatacctccctccccgaatcgccgt
gagtccgccatcgacttccttcccgacttcggcggagcctcgtggatcgcctacggcgcc
gcctctctccttgtcatctcccatttcccttctcctctctcctcccatgagatcaaggtt
ggtcctctcttccgccaagtcatcgagatgcctcccccttccgatgccaccgccgcggct
tccgtgaacgccgtttcttggtgcccggccatcccgtccgagggagaaatcgccgccgct
gcggggagttgcatctggatgtattcgcccgtccccgctcgcgacggatcaggttctttc
tgttggaagcaggctgcaaccatcgtagagacttttatagtagacactatcgaatggacg
ggatcaggagatgggttgatagtagccggagttgatgttgttttatgggtaaggaaggaa
acctcatgggaaatgacttggaggtcaagagcaaaagtgcctcaagtgctcgtttctgca
acctggcttgcagaagggcctgttgctacgggagctcatgcagtggctcactgcaatgga
acaaatccagcagcagcatcctctctctctggagaggaatataagcatgtttttgtctat
ctaagtgatgagaaatctgggttaacaaaaattcagctctgtcatccgcagcctgtttca
atgattcaatggaggccattcgctagggcacaatcagaaaaagatgcttcacatgtttgg
aggaatgtcctgttgacttgctgcttagatggaactgtaagattgtggagcgagaatgaa
attggtaggtctagaaaaattggtaaagatgcacatgatcagaggaatacaagaagatct
ttcaatgttattgcagtaattgagataaacaagtgttcaaagggaatgcttgggaaagat
atatttgtaaaatgggccattgaatttggtggtgttatttctaaaggagaaggggataga
tatgacttatggccaagtgattttgagcaacaccaggttggcaagtgtgagtggcttatt
ggtatagagtctaatttctctgttactttttgggcaatccattgccttgatgatgtatct
cctgcaaggtttcctcgggtaactctatggaggaaacagcacctgatggatttgaaaaca
tccgtaattaattatgactcttcaaattctgaaggtcaacctatctttattaaggtagtt
gcttcaagaagattatgttttggttcacctgatgtttgctctttgcttcagttgttgcct
gataactcgataatttggtcaatgctctatagtccaatattagattgtacagatgatgtc
gtttcaagtaaaaacattacagagaaatgccttttctcttttgctggtgaagttctaaat
caagatggtcacacaggtactatcaggcaagtttgtgtgcatccatatagttgtgaaatt
gagattgctgcttcactggattctgatggccttcttcttttgtggtccatttctaccttc
tccactttcacctggaacttgcaaactgccttgcatcctctgtggagactcttgggcaga
atttatctacgagatctttccacagatagtggctactcatgtctgagctgggcaccttca
attcttgatgataatcgatttcttcttttaggatcggaaaatggaattgattgctttata
atcagagttcctggaacaggtgagaatgttctatgtcaaaagatacttacaattccttat
ggtgttggtaaaaatggagaagggcccccagaccatgttttttctacacctgtaacttct
aattgcgggaaatctctactctccagtagtttcttgctcttctgtatatggaagaagaaa
tttcaagctttatcatggaaagttgtcttgcattctggagacccaaatgaaggatattgt
ggatgtggctttgatgcaaaatcaattttgtttgagggtaaaatgtattttgcaaaggtt
tacctgggttcctcagtcttcccatcccctcaggaaagtgaccagaccacatcttctgct
atagtttctatgaataagtctgtgatatcagtagagcaatatgtgtcttcttacaatggt
tcaggcaacagttctccaagttatcatttggtaacaggttgctttgatggcactttgaaa
ctttggaaaatgtcctgtgaggaaaatgcttttcattctgaaaaagaaatcctctgctgg
gatctagtaggcatgtttactgctcatcaaggagctgttacttcaatttctttgtccagc
tgtggttttaaaattgcctctgccagcacaagtcctcaaactaatattacaagtcttcat
gtttgggaacctgtttgcctgatgggtggtgggagttttttgttcgaagatgctataatc
ttgcaagacaccgttgttggtttaagttgggtatctttgggcaatggccaattattgctt
ggagtatgcctaccaaatgagttacgtatatattgtcatagacgaccttctggccagaat
ttggtgcactcaaagaagtcaaaagagatgcatttttggaattatattgcagtggcacat
tcatatccagtcattaaggagttcttctgggcacctaaggtcactcctgtgcttgttcat
gagaaacatttttctctattcagtcaatggcaattcagaacagatcttaaggatagtgta
gatcattctattacatattctgctgcagtcggtgaatattttccttctattacaaatatt
gaaggaactaatatttataaagctggatcttcaaagggttccaacaacggaaaaaatggc
tgtgcagattgctcttcatgtccagttacatcaaatcaacacaatgatcctaatttcatg
aacagattatttaatctgatggatatagtcgataggttgggaggacctttagcagtctat
caccctcaggcacttatccagcatctttattcaggtaactggaaacgtgcacagattgtt
ctgcagcatctcgctgaatctatcaggacctctgaaacttccactaccaatatggagtgt
actggctttggtgaatcagggcatattattcctgagatccatctgtctgattactttatg
gatactacctccacgaacttttcatataaaggattacagtggggtgagaatagtactact
agagtttctgattttcatttccatgcaaatgtccttcatgatgtggcctctcagaaatct
gaagtcacaggttttgcccatactctcaataagtgtttggatgttgctgcaattactgac
attgaaagaatgcaaatccttgtcattgtggatcttttggttgagatcagtgatttaagt
cgtgcctctgcatacaaaacccttgatgaaccaggccggaggttctgggtagcagtggag
tttcagcgtcgatattttcttcgaaagtttggaaattctgctgctgcagaaggctttttg
gttgattctgcatcagttgcatgggcactccaatctgattgtcaagatgacctgcttaag
tctcttctttctctagaaccaacctggccagaaatgcgaaatcttggtataggactttgg
tacaccaatgtaacacaactgcggacaaagatggagaagttggcaagattacaatatctg
aaaaacaaggacccaaaggaatgtgctcttctatatttagcactgaatagacgtcaagtt
ttggctagccttttcaaaattagcaaagacgagaaagataaaccattatttggatttctc
tcacgaaatttccaggaagaaaaaaataaagctgctgctttgaaaaatgcgtatgtttta
atgggaaggcatcaattggaacttgccgtagcttttttcctgcttggaaatgatccttca
tctgctgtgactgtctgtgcaaagaaccttggcgatgaacaacttgctcttataatttgt
cgacttgttgaaggatatggagggcctctggagcatcaccttatttccaatgtattgctt
cctaacgcaattgagaaagaagactattggctttcaagcattcttgaatggacattaggg
aacttttctcagtctgtccagaaactttttgactcccagtataagactcagattagtcag
tctgccgctatgggcaaccatgctgtatgttcagacccaaaaattggtcagtactgtgta
tatctttcgacaaaaaataattttaagaattctgttggtgatgctctggctgcaaaattg
tctaagctgtcaacctcattggttgcaagtgcgttgaaaagaattggactcccacttgaa
gcactggaatgcttatcctcttccttgagtattgatactaaagatcaagggagctcattg
catgttggagatcagatctttcataaaatactgaaccctttccctggtgctgctcccaat
tggctatcaagagatgtggcggcaaacttcgagttgaatgctaaactgaacatggcgtca
gaatacatgtctcatttgctaataggtcatccacaatggcctgatgtaggattaaccaga
gaagtcagccacaaagagcatgatgatttgcagataggaggactcaagcatgatgtcgag
attgcaatatctgtattgcgaaagaagttctctcttaaacttcttgacttagctggcatg
atcctagtttttgcctgcaacaagggattcccttttcttgcatacctgttgttccatgcc
aacagatctccagaaaatgaagctgataattgtggtcttgatgcttctagttctacctca
agttataccctgtttagactgcttttgaaggcaaatgaggagatatgctattttgttgct
cgatacgttgtgtcctgccatttcacagattccacactcaagttggtatgcaatagaaat
ttcacttttgaaaatgattataatgagaaagtttgtttaccaaaattaacctacttattg
aggagcagcagatctattttgaagcattacaatggaggaatttttgcaaacaagaataca
ttgagtatatttgctgttcttgatcttcttgaatatagtgtagagtttgctttcacctgg
ttacagaaagatgtgaaaggactaatcatgatgatcgctccaatcttagatgcatctgtc
aatagctcgacctttttagtcataatagatgagctaatgaaagttttacacaagaaatgt
cacgatgcatcaagaaatggagtcaaatatatccctgatgattacttttcagaaagacag
cttaaaaacagtgaggattcaatgcctccaattgatgagaaatggcacttaataggcgct
tccttgtggatacacctgttgaccttcatgaagaaccatttagacaacattctagtgatt
gaaaagcttcaagatgaaagcactaagatgaacaaagacttgactaatatgtttcctttt
catgttatcgatctattggtgaattcattgaattgtgttacctcctcattgatcaagcag
tttgcttcatttataagacataaaatatcaaagaatattctttccagtactcttttctgg
ttagatgaatataactactctcagtcagggtccttgaatcattttcaggacctgcggctt
agtagtttgctattgtctggcaatgaagacaaagaatcacttttcagtttattatggaaa
atatctgttagtcctcaagatatctgtgctagtttggcaaatgagagtgttaattatttt
cctcataatggccaaaagctctcaatgtcatggaaagatatggaaaagagtgcatctgtt
gattatgaaattggtgcttctgaaaatagtcgagcagagaatgaattcagttctacctct
cctagttatggaacaggaagaagatttattgggagggcctctgaggcagatgaccttcta
gaaacaagaaggaaacatccaagtgccgagaaagagactagttattttcacaatccaaga
gaattaatgaagagaaacggagagcttttcgaggcaatctgcttcaattctatcaatgag
catcaagttgcagttgcaagcaacaagaaggggcttctctttctcaattggaatggtgag
caacacttcaaaaggcagacagaattcgcagaatatatctggtcagaatgtgattggcca
caagatgggtgggctggttctgaatctaccccaattccaacttatgtttctcctggcatc
ggtcttggaagcaaaagaggtgctcaccttgggttggggggagcaacaactggtttgggc
tctttggcacggccaaggagagatctgatgggtgggggcgcatttgggattccaggttat
gctggtattggtgcctctggtttaggttggggtgaacaggaagattttgaagagtatgtt
gatcctccagcaacagttgagaacgtacattcaagagcattatctcatcatcctacacgt
cctttcttcttagttggatctagcaatacacacgtgtacctttgggagtttggtaaggac
agagctctggcaacatatggtgtccttcctgctgctaatgttcctccgccttatgcactt
gcatctgtgtcttccctgcaatttgactactatggacaccgattcgctactgctgcgtta
gatgggacaatttgtacatggcagcttgaggtcggcggaaggagcaatattcaccctcta
gactcatctctttgctttaacaaccatgcatcggatgttgcctatgtgtctggaagtgga
tcaattctcgctgcagctggatgtagctcaaatggtgccaatgttgttatctgggataca
ttggctccaccacccacatgtcaagcttccgttttttgtcatgaaggaggagctcgttcc
ctttcagtgtttgacaatgatattggaagtggatctatttctcccctaatagttacggga
gggaaaaatggagatgtcggtttgcatgacttccgctacatcgcaactggaaagacaaag
cgtcataagaattgtaatgaactagatcttaaatccactgttatccatgacacaacatat
ggagctcccaacattggtgacagttccaatggaatgctttggtatataccgaaggctcat
ttaggtagtgtcactaggatatcaactatcccaaataccagcttgttcttaactggtagc
aaagatggggacgtgaaactttgggatgccaggaggtcccagttggtctttcattggcaa
aagttgcacgatcgacataccttttttcagccaaactccagaggcttcggtggagttgtt
agggcggctgtcacagatatccaggtgttatctcatggttttcttacatgtggtggagat
ggttctgtaaaacttatcgagctccaataa
DBGET
integrated database retrieval system
