KEGG   Typha angustifolia (narrow-leaf cattail): 140766914
Entry
140766914         CDS       T11061                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    140766914
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tang03021]
    140766914
Enzymes [BR:tang01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     140766914
Transcription machinery [BR:tang03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     140766914
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpa2_4 RNA_pol_Rpb2_2
Other DBs
NCBI-GeneID: 140766914
NCBI-ProteinID: XP_072962703
LinkDB
Position
9:join(3669374..3669533,3669641..3669714,3669800..3669919,3673314..3673390,3673944..3674007,3674513..3674583,3675901..3675978,3676065..3676110,3677135..3677315,3677405..3677457,3677549..3677622,3677739..3677856,3678877..3678961,3679795..3679907,3681706..3681833,3681907..3681986,3682329..3682570,3682654..3682815,3682933..3683097,3683195..3683269,3684864..3684967,3685043..3685118,3686194..3686322,3686427..3686570,3686821..3687033,3687324..3687578,3689407..3689820)
AA seq 1166 aa
MASKSKPDYEALRDLFRPHIESFDYFLDEGLEKAILSIRPAEISDPSTGSKLRISFEKAH
VLPPMKEGRLSAPLFPFECRQARTSYAGEFRVALILQYNEGAAVRETINFGRIPIMLKSK
LCHLRGADPQKLVYYKEEATEMGGYFICNGLERLARLLIIQKRNYPMAMVRNSFRARGAG
YSDKAVVIRCVRDDQSSVTLKLYYLLNGSARLGFWIRGREFLLPVGIVLKALIDTNDREI
FVSLTCCYNDKYQREKGVVGTQLIGERAQIILDEVRVLSLFTRSQCLGHIGEYFQPVMDG
FETESHETVAEAVLRDFIFVHLSSNHDKFNLLIFMLQKLYALVDQTAAPDNPDALQNQEV
LLPGHLIAIYLKEKLQDWLNKSRRQIQEEIAKKDNFQFKNMLQIKKILARSSGSIGRAME
SMIKIGRLNTSSGLDLPQREGMTIQAERLNYCRFISHFRAVHRGASFAKMRTTSVRKLLP
ESWGFLCPVHTPDGEPCGLLNHMTSACRVASFYNSDGKIKDFLKIRMSILTVLVGIGMTP
LLPKLERAGPPEVLHVLLDGCVVGSIASSEVEKAVAHLRSLKLFALSGIPEDLEVGYVPL
SLGGAYPGLYLFTNPARFVRPVRNLSPPDGSQNIELIGPFEQASMEIRCPDGGDGGRRES
FPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKSYH
LQTPQSPIVRTATYSKYSMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFRGHI
YQTESIDLAKKHDGGDRILEIFARSNDRNMNSSSIDSDGLPYIGEMIYPNEPLYSSYNTL
TSVTKPTKLKGSEPVFIDYVSVDGTSSKGYMQKVNIRTRRTRNPVIGDKFSSRHGQKGVC
SYLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFAA
SVKEANEDKTTKSSSVVDELGPLLASYGFNYHGLEVLYSGVFGTELTCEIFIGPVYYQRL
RHMVSDKFQVRSTGVVDQITRQPIGGRKRGGGIRFGEMERDAILAHGAAYLLHDRLHSCS
DYHIADVCSYCGSILTATTIQPQKRAVREIHGLPPARTPKSFTCHACKTKKGMETVAMPY
VFKYLASELAAMNIKMELRLSNKQGG
NT seq 3501 nt   +upstreamnt  +downstreamnt
atggcgtcgaagtcaaagccggattacgaggctctccgcgacctcttccgcccccacatc
gagtcgttcgactacttcctcgacgagggcctcgagaaggctatactctccatccgcccg
gctgagatctccgacccgtctaccggatccaagcttagaatatcctttgagaaggcccac
gtgctcccgccgatgaaggaaggccggttgagtgcacccctttttccctttgagtgcagg
caagcgagaacgtcttatgcaggagaattcagggtggctcttattttgcagtacaatgag
ggggctgccgtgagagaaacaatcaattttgggcgtatacccattatgctgaagtcaaag
ctatgccatctaagaggtgctgatcctcaaaaactagtttactataaggaggaggcaact
gagatgggagggtactttatctgtaatgggttggagaggcttgctcgtcttcttatcata
caaaagcgtaactatccaatggctatggtgcgtaactcatttcgtgctcgaggtgctggg
tacagtgataaagcagtggtcataagatgtgttcgggatgatcagtcttctgtgacgctt
aagttgtattaccttctaaatggaagtgcaaggcttggattctggataagagggagggag
ttcttgcttcctgttgggattgttttgaaggctctcattgacactaatgaccgcgaaatc
tttgtgagcctaacatgctgctacaacgataagtatcaaagagaaaaaggtgtggttggc
acgcagctcataggtgaaagggcacaaataattcttgatgaagtcagggtgttgtcgctt
ttcactcggtcacagtgcttggggcatattggagaatacttccaacctgtcatggatggc
ttcgaaacagaaagtcatgaaactgttgcagaagctgtccttagagactttatatttgtg
catcttagcagcaaccacgacaagttcaatctacttatatttatgctgcagaaactctat
gcacttgtagatcaaactgctgcgcctgataaccctgatgcactgcaaaatcaggaggtt
ttgcttcccgggcacctgattgctatttacctcaaggagaaacttcaagattggttgaac
aagtcaagacgtcaaattcaggaagagattgcaaagaaagataactttcaatttaagaac
atgctacagattaagaaaattttagctcgaagttctggatcaataggcagagccatggaa
agtatgataaaaattggaagattaaatacatcttcaggtttagatttacctcagagagaa
ggcatgaccattcaggcagaacggctcaactattgtcgtttcatctcacattttcgtgct
gtacatagaggtgcttcttttgcaaaaatgcgcacaacaagtgtacgaaagctgcttcca
gagtcctggggtttcctttgtcctgttcatacacctgacggggaaccttgtggtttgcta
aaccatatgacttctgcttgccgtgttgcatctttctacaactcagatggaaaaattaaa
gatttcctcaaaataagaatgtctattttgactgttttggttgggattggaatgacccca
ctactgccaaaacttgagcgggctggtcctccagaagtccttcatgttctattggatgga
tgtgttgttggctctattgcttccagtgaagtagaaaaagcagttgctcatctccgaagt
ttaaaactttttgcactttcagggatccctgaggatttggaagtaggctacgtacctttg
agtcttggtggggcctatcctggtttgtatcttttcacaaatccagctagatttgttcgg
ccagtcagaaatctttcgcctcctgatggaagtcaaaatatcgagctaattggtccattt
gaacaggcatctatggaaataaggtgtccagatggtggtgatggtggaagaagagaatca
tttcctgcaacacatgaagagattcacccaactgcaatacttagtgtagttgccaatctc
acaccttggtctgatcacaatcaaagtcctcgcaacatgtatcagtgccagatggcaaaa
cagacaatgggtttttcatcccaagctttaagatttaggacagatgtcaaatcatatcat
cttcagactcctcaatcaccaattgtgcggactgctacgtatagcaaatattccatggat
gaattcccaacaggaacaaatgctattgttgcagtgcttgcttacacaggttacgatatg
gaggacgcaatgattttgaacaagtcatctgttgagcgtggtatgtttcgtggtcatata
tatcagacagaatccatcgacttggcaaagaagcatgacggaggagatcgcattttagaa
atctttgccaggagcaatgatagaaacatgaactcctcctcaattgattcagatgggctt
ccatatattggagagatgatatatccaaatgagccgttgtatagctcatataacacactc
accagtgtaacgaaacctactaaactaaagggttcagagccagtatttatagactatgtt
tctgttgatggtactagctcaaaaggttacatgcagaaggtgaatatacgcacccgccgc
actagaaatcctgtgattggtgacaagtttagcagcagacatgggcagaagggtgtctgc
tcttatttgtggcctgatatagacatgccattttctgcagttactgggatgaggccagat
ctaattatcaatcctcatgcatttccttcgagaatgaccataggaatgcttttagagtct
attgcagctaagggaggaagtctgcatggaaaatttgttgatgcaactccttttgctgcc
tcagtcaaggaggccaatgaagataagacaacaaaatcaagctctgtagttgatgaactg
ggtccactgctggcatcttatggtttcaattatcatggattggaggttctttatagtgga
gtttttggcacagagttaacttgcgagatattcattggacctgtttattatcaacgtcta
cgacatatggtctccgataaatttcaggttcgttctactggagttgtggaccagataacc
agacagccaataggaggaaggaaacgcggcggaggaatccgttttggtgaaatggaacgt
gatgcgattctggctcatggagctgcttatcttttacatgacagactccattcttgctct
gattatcacattgcagatgtttgctcatattgtggaagcatattgacggcaaccaccatc
cagccacaaaaaagggcagtgcgggagatccatggtctaccacctgcaagaactcccaag
agcttcacatgccatgcctgtaaaacaaaaaaggggatggaaactgttgcaatgccttac
gttttcaagtatttggcctctgaattagctgcaatgaacataaaaatggagcttcggctg
agtaataaacaaggtggctga

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