Typha angustifolia (narrow-leaf cattail): 140766952
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Entry
140766952 CDS
T11061
Name
(RefSeq) ubiquitin domain-containing protein DSK2a
KO
K04523
ubiquilin
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140766952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140766952
03051 Proteasome [BR:
tang03051
]
140766952
Membrane trafficking [BR:
tang04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
140766952
Proteasome [BR:
tang03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
140766952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Dsc3_N
Rad60-SLD_2
UBA_HOIP
XPC-binding
Motif
Other DBs
NCBI-GeneID:
140766952
NCBI-ProteinID:
XP_072962768
LinkDB
All DBs
Position
9:join(1972267..1972474,1973945..1974673,1974760..1974974,1975045..1975158,1975239..1975297,1975645..1975673,1976127..1976216,1976338..1976486)
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AA seq
530 aa
AA seq
DB search
MGGEGDSGKEATVHVRCSNGSKFSVQTDLGATVGAFKALIAVNSEVPPEQQRLIYKGRIL
KDEQTLTSYGVESDHTIHLVRGVASSAATAATASANLGASRTPNSTSVGSGGSQFPGLGI
NGLAGNGASGLFGSGIPEFDEMHQQLTQNPNMMRDIMNMPVIQSLMNNPDLMRNIIMNNP
QMREIIDRNPDLAHILNDPNTLRQTLEAARNPELMREMMRNTDRAMSNIESSPEGFNMLR
RMYETVQEPFLNATTMAAEGNASSNPFAALLGNQGANQTRDPSTNPPTASSEATTGVPAP
NTNPLPNPWSTNNGGAQAGNNTRSAPAADTRAAGTAGLGGLGLPDLENMIGGVQDPSILS
QVLQNPAMSQMMQSMLSDPQSMNQMLSVNPSMRSLLESNTQLREMFQNPEFLRQLMSPET
MQQLLTFQQSFLSQFGRQQSSQEQNQTGGGTGMAGNASLELLMNMLGGLGGGGLGVPNTS
NVPPEELYATQLSQLQEMGFFDTQENIRALSATAGNVHAAVERLLRNLGQ
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtgaaggcgattctgggaaggaggccaccgtccacgtgaggtgctccaatggc
tccaagttctctgtgcagacggacctgggggccaccgtcggggctttcaaggccctcatc
gccgtgaatagcgaggtgccgccggagcagcagcgcctgatctataaaggtcggatcttg
aaggacgaacaaaccctcacgagctacggtgtggagtcagatcacactattcacttggtt
cgtggtgtcgcctcatcagctgcaacagctgcaacagcttcagctaatcttggagcttca
aggactcccaacagtacatcagttggttctggaggttcgcaatttccaggccttggtatt
aatgggttggccggcaatggggcttcaggcctatttgggtctggaattccagaatttgat
gagatgcatcaacagcttacgcagaatcccaacatgatgagggatataatgaacatgccc
gtcatacagagtctcatgaataaccctgatctaatgcgtaatataatcatgaacaatcca
caaatgcgtgagatcattgaccgaaatcctgatcttgctcacatccttaatgatccaaat
actctccgccagacacttgaagcagctaggaatcctgaactcatgagagagatgatgagg
aacacggacagagctatgagcaatattgagtcttctccagaagggtttaacatgcttagg
cgcatgtatgaaactgtccaggagccttttctgaatgcaacaacaatggctgcagaaggt
aatgcaagctcaaatccatttgcagctctcttgggaaaccagggagctaatcaaaccaga
gacccatcaacaaatccaccaactgccagctcagaagctacaacaggggttcctgctcca
aatactaacccacttccaaatccttggagcaccaataatggaggtgcacaggcagggaat
aacaccagatcagctcctgcagctgacacaagggcagctggaactgctgggttaggaggc
ctgggtttgcccgatttggagaacatgattggtggtgtgcaggatccttccattctaagt
caggttttgcaaaatccggcaatgtctcagatgatgcagagcatgctttctgatcctcag
tctatgaaccagatgcttagcgtcaatcccagtatgcgtagcctgctagagtccaatact
caattaagagagatgtttcagaatcctgaatttcttcgccagcttatgtctcctgagaca
atgcagcaactgctaaccttccaacagtcttttctatcccagtttggacggcagcagtca
agccaggaacaaaaccagacaggcggtggcacaggcatggcaggcaatgctagtctggaa
ttattgatgaacatgcttggtggacttggaggcggaggtcttggtgttcctaatacatct
aatgtgccaccggaagaactatatgcaactcaactatcccagcttcaagaaatgggtttc
ttcgatactcaggagaatatccgagcattaagtgccactgctgggaatgtccatgctgca
gtagagcggcttcttaggaaccttggccaatag
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