KEGG   Typha angustifolia (narrow-leaf cattail): 140766969
Entry
140766969         CDS       T11061                                 
Name
(RefSeq) protein PIR isoform X1
  KO
K05749  cytoplasmic FMR1 interacting protein
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140766969
Messenger RNA biogenesis [BR:tang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     140766969
   Factors involved in mRNA localization
    Other mRNA localization factors
     140766969
SSDB
Motif
Pfam: FragX_IP CYRIA-B_Rac1-bd WASH-4_N
Other DBs
NCBI-GeneID: 140766969
NCBI-ProteinID: XP_072962795
LinkDB
Position
9:join(4821516..4821569,4822654..4822726,4832091..4832155,4842447..4842524,4842708..4842827,4843464..4843534,4844705..4844797,4851146..4851215,4851368..4851432,4851755..4851950,4852108..4852259,4854178..4854271,4854715..4854930,4855523..4855734,4857924..4858068,4858361..4858529,4859457..4859533,4860797..4860967,4861528..4861604,4861684..4861786,4863238..4863357,4863510..4863653,4867761..4867910,4870483..4870626,4871506..4871593,4872826..4872953,4874154..4874358,4878103..4878275,4879144..4879365,4880146..4880340)
AA seq 1289 aa
MAIPVEEAIAALSTFSLEDEQPDVQGLAVLLSSERYATNSPIEYGDVASYRLSLGEDTKA
INQLNTLVKEGKEMASLLYTYRSCVKALPQLPDSMKHSQADLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERLINGPTITHFWSMLKLLDVLLQLDHLKNAKASIPNDF
SWYKRTFTQVSIQWQDTDSMREELDDLQIFLSTRWAILLNLHAEMFRTNTVEDILQVLIV
FCVESLELDFALLFPERHTLLRVLPVLVVLATSTEKESESLYKRVKINRLLNIFKNDPVV
PAFPDLHLSPAAMLKELSTYFQGFSSQTRLLALPAPHEIPLRELQDYQRHYLIVNHIGTI
RAEHDDFSIRFASSMNQIVILKSTDGADDEWSREVKGNMYDMVVEGFQLLSRWTCRIWEQ
CAWKFSRPCKEPAWSDSNQCPTTFFDYEKVVRYNYTTEERKALLELVSYIKSIGLMMQRC
DTLVADALWETIHVEVQDFVQDKLDTMLRTTFRKKKELSRILSDMRTLSADWMANTSKAE
PEMHSLQEHEETRQNTFYPRPVAPTAAQVHCLQFLICELVSGGNLRKPGGLFGNSGSGIS
VEDLKQLETFFYKLSFFLHILDYTATIGTLTDLGFLWFREFYLESSRVIQFPIECSLPWM
LVDHVIESQDAGLFESILLPLDIYNDSAQHALTVLKQRFLYDEIEAEVDLCFDQLVYKLN
ESIFLYYKSCAASALLDRSYISACDDGEKYSVKPIRFDEIFKLRRVKVLGRAIDLRSLIT
QRMNKLFRENIDFLYDHFENADICAVVELQQLLDILEHTHELLSQYLELDSYPLMLNEMQ
ENLSLVSYSSRVSSQIWNEMQNDFLPNFILCNTTQRFVRSPIGTHHTSQRTAFSTKKPYF
YCGSQDLNLAYQSLAGLYHEFFGIPHMFAVVKLLGSRSLPWIIRALLDHISSKIIAIGPK
VTGLQEALPKSIGLLPFDGGVAGCLKIIHEQLTWGAKSELKAEVLRDLKEIGSALYWMSL
LDIVLKQVDAAQFMQTAPWLGFVPGTDGQVKQIDTVNSPFTNLFSSATNSVVSDPTYPNP
SSFLIMSKQAEAASLLYKRNMNSGSVLEYALAFTSAALDRHYSKWSATPKTGFIDITTSK
DFYRIFSGLQFGFLEETILDPVKKHEMFGDSVAWAGCTIIYLLGQQQHFELFDFSYQFLN
VSEVESATVSLTLSSDRAKSSNFLQGYENLLEAFRKARRLNNHVFSMLRARCPLEDKVAC
AIKQSGAPLHRVKFVNSVSAFETLPQRGA
NT seq 3870 nt   +upstreamnt  +downstreamnt
atggccattcccgtggaggaagccattgctgctctctcaaccttctctctcgaggatgaa
cagccagatgtgcaaggattagccgttctcctatctagtgaaagatatgcgactaatagc
ccaattgagtatggagatgttgcatcttaccgtctctctttgggtgaagatacgaaagca
atcaatcaattgaataccctagttaaagaaggaaaagaaatggcatctttgctgtacaca
tatcgcagctgtgttaaagcccttcctcagctacctgattccatgaagcatagccaagca
gacttatatttagagacctatcaagttcttgacttggaaatgagtcgtctacgtgaaatt
cagagatggcaagcctctgctgcttccaaactggcagctgacatgcagagattttctagg
cctgagagactgataaatggacctacaattactcatttttggtctatgttgaagttgctt
gacgttttactgcaacttgatcatttgaaaaatgcaaaagcaagcatacctaacgacttt
tcgtggtataagagaacatttactcaagtaagcattcagtggcaggatactgactcaatg
agagaagagctagatgatctgcagattttcttaagcacaagatgggctatcttactgaac
ttgcatgctgagatgttccgtacgaatactgtggaagacattctacaagttcttattgta
ttctgtgtggaatcattggagttggactttgcactccttttccccgagcgtcatactcta
cttcgtgttttgcctgtgcttgttgtcctagcaacctcaacggagaaagagagcgagtct
ctctataagagagtgaaaataaaccgccttctaaacatctttaagaatgatcctgttgtt
ccagcgtttccagatcttcatctttcacccgctgcaatgttgaaggagttgtcaacatac
ttccaaggtttttctagccaaacacgtttacttgctcttccagcaccacatgaaattccc
cttcgagagctgcaagattatcagaggcactatttgattgtaaaccatattgggaccatt
cgggcagagcatgatgacttctccatccgctttgcttcttctatgaatcagattgtaata
ttgaagtcaactgatggggcagatgatgaatggtctagagaagtcaaaggaaacatgtat
gatatggttgtcgaagggtttcaacttcttagcaggtggacctgtaggatttgggaacaa
tgtgcttggaaattttcacgtccttgcaaagaaccagcttggtcagattctaaccagtgc
cctacaacattttttgactacgaaaaggtggtgcgttataattatacaacagaggaaaga
aaagcgctattagaacttgttagctacataaagagtattggcttgatgatgcaaagatgt
gacaccttagtggcagatgctttgtgggaaacaatccatgtggaggtgcaagattttgtg
caagacaaactagataccatgctacgaactacattccgaaaaaagaaggaattgtctagg
attctctccgatatgcggactctgtcagcagattggatggctaatactagcaaggccgaa
ccggaaatgcattcactgcaagaacatgaggaaacaagacaaaatacattttacccaaga
ccagttgctccaacagctgctcaggttcactgtttacaatttcttatttgtgagcttgta
tctggtgggaatttaagaaaacctggaggactatttggaaacagtggttctggaatatca
gttgaagatcttaagcaactagagacattcttctacaagctcagcttttttctgcatatt
ttggattatacagcaacaattggtacattaactgatcttggatttctttggtttcgagaa
ttctatttggaatcttctcgtgtaatccagtttccaattgagtgttctcttccatggatg
ttggtggatcatgtgattgaatctcaagatgctggactttttgaaagcattttgcttcca
ttggatatctacaatgattctgctcaacatgcacttactgtgctgaaacagcgatttctt
tatgatgaaattgaagctgaggttgatctatgttttgatcagctcgtttacaagcttaat
gagagtatctttttgtattataagagctgcgcagcaagtgcattacttgatcgatcatat
atctctgcatgtgatgatggtgaaaagtattctgttaaacccattcgatttgatgagatt
ttcaagttgagaagagttaaggtgttaggtagggctattgatcttagaagtttgattact
caaagaatgaataaattattccgggaaaatattgactttttgtatgatcattttgaaaat
gcggatatatgtgccgtcgtggaattacaacaactcttggatatcttggagcacacccat
gaattactttcacaatatcttgagctagattcatatcctcttatgctgaacgagatgcag
gagaatctttctctcgtctcatactctagtcgtgtctcttctcagatttggaatgagatg
cagaatgacttcttgcccaactttatcctatgcaatactacgcaacgttttgttcgatct
ccaataggaactcatcatacttcgcagaggacagctttttctactaaaaagccatacttc
tattgtggttctcaagatttgaacttggcatatcaaagccttgctggactgtatcatgag
ttttttgggatccctcacatgtttgctgttgtaaaacttctagggtcgagatcattacct
tggatcattcgtgccttactagatcatatctcaagtaagataatagcaataggaccaaaa
gtcactggattacaggaagcactgccaaaatctattggactacttccattcgatggtggt
gtagcaggttgcctaaagataattcatgaacagttaacatggggagcaaaatcagagctc
aaagcagaagttcttcgtgaccttaaagaaattggaagtgccctatattggatgagcctt
cttgacatcgtgttgaaacaagttgacgcagcacaattcatgcagacagccccatggtta
ggatttgttccaggaactgatgggcaagtaaaacagattgacactgtcaatagtccattc
accaatttgtttagttctgctactaattcagttgtatcagaccctacatacccaaatcca
tcctcattcctcatcatgtcaaaacaagcagaagctgcaagtcttttgtacaaaaggaac
atgaactctggaagtgtgctagaatatgctcttgcttttaccagtgcggcactagataga
cattatagtaaatggagtgcgactccaaagacggggtttattgacatcacaacttcaaag
gatttctatcgcatttttagtggccttcagtttggattcttggaggagaccattcttgat
ccagtaaaaaaacatgaaatgtttggtgattctgtggcttgggctggctgtacaattatc
tacttgctggggcagcagcagcactttgagctttttgatttttcttaccaattcctcaat
gtttcagaagtagaaagtgcaacagtttcattgactctatcttcagatcgggccaaaagt
tctaattttttacaagggtatgaaaacctattagaagctttcaggaaagctagaaggttg
aataaccatgtattttccatgttgagggcacgctgcccccttgaggacaaagtagcttgt
gcaatcaagcaaagtggagctcccctgcaccgagtgaagtttgtcaactctgtatctgct
tttgagacattgccacaaagaggtgcctga

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