| Entry |
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| Name |
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
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| KO |
| K03131 | transcription initiation factor TFIID subunit 6 |
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| Organism |
tang Typha angustifolia (narrow-leaf cattail)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:tang00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140766982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:tang03021]
140766982
03036 Chromosome and associated proteins [BR:tang03036]
140766982
Transcription machinery [BR:tang03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140766982
Coactivators
SAGA/TFTC/STAGA complex
140766982
Chromosome and associated proteins [BR:tang03036]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
140766982
STAGA complex
140766982
TFTC complex
140766982
SAGA complex
140766982
SLIK complex
140766982
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
9:complement(join(5518117..5518493,5520165..5520276,5520389..5520514,5520589..5520721,5523516..5523640,5523883..5523978,5524069..5524206,5524328..5524434,5526360..5526468,5526549..5526650,5527232..5527318,5527412..5527537))
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| AA seq |
545 aa
MSTVPKEMIEVIAQSIGIANLSPDVALALAPDVEYRLREIMQEAIKCMRHSKRTVLTADD
VDGALSLRNVEPIYGFASGDPLRFKRAVGHKDLFYIDDRDVDLKEVIEAPLSKAPLDIAV
VAHWLAIEGVQPAIPENAPLEAIIAPSESKRSEHGKEDALPVDIKLPVKHVLSRELQMYF
DKITELTLSRSESVLFKEALVSLATDPGLHPLVPYFSYFIADEVARSLNELPVLFALMRV
IRSLLRNPHIHIEPYLHQLMPSMITCLVAKKLGHRIADNHWELRDFSANLVSSVCRRFGH
VYHNLQSRLTKTLIHAFLDPSKALTQHYGAIQGLSALGPGVVRLLILPNLETYMQLLEPE
MQLDKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPGLLSPSTRSLRRIKGRVATNMP
NKRKSSTSLLSQQPPLKKLATDASMGSITPISLTANMQGATDVFPSQSSNSGIIQSSSSG
QISKDTLSGAIRRDKGGAQPQKSSAVLSQAWKEDLDAGHLLTSLFELFGEGIFSFTQPAE
MSFFL |
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| NT seq |
1638 nt +upstreamnt +downstreamnt
atgagtactgtccccaaggagatgatcgaggtgattgcgcagagtattggaatcgcaaac
ctctccccagatgttgccctcgcgctcgcccccgacgtcgagtaccgccttcgcgagatc
atgcaggaggcgatcaagtgcatgcgccactcgaagcggacggtgttgacggcggacgac
gttgatggcgccctcagcctcaggaatgtcgagcctatatatggatttgcttctggggat
ccattacggttcaagagggctgtggggcataaggatctcttctacattgatgacagagat
gtggatctcaaagaggtgattgaagcacctctatcgaaggcacctcttgatattgcagtt
gtagctcactggctagctattgaaggggtgcaacctgcaattccagaaaatgctcctctt
gaagcaattatagccccatcagaaagcaaaagatccgagcatggaaaggaagatgcgctt
cctgttgatatcaaacttcctgttaaacatgtattatctagagaactacagatgtacttt
gataaaattactgagctcactcttagtagatctgaatccgttctttttaaggaagcgtta
gttagtttggcaacagatccaggccttcatcctttggttccttacttttcgtacttcatt
gcagatgaggttgctcgaagtttaaatgaacttcctgttttatttgctttaatgcgcgtc
atccgaagccttctccgaaatccacacatccacatagaaccttatttgcatcagttgatg
ccttccatgataacatgccttgttgccaaaaagctggggcacaggattgccgataaccac
tgggaacttagagatttctcagcaaatttagtttcttcagtgtgtagaaggtttggtcat
gtatatcacaacctccagtcccggctgacaaaaactctcatccatgcttttctggatcca
tctaaagcattgacacaacattatggtgcaatccaaggactttctgcattaggacctggt
gtggtgcgacttctaattctgccgaacctagaaacgtacatgcaacttttggagccagag
atgcagcttgataaacagaagaatgaaatgaagaggaaagaagcatggcgtgtctacggt
gccttgttgtgtgctgcaggtaagtgcctgtatgatcgactcaagttgttccctggtttg
ctctctccatcaacacgttctcttaggagaattaagggaagagttgcaactaacatgcca
aataaacgcaagtcaagcaccagcctcttgtcacagcagccacccctgaagaagcttgca
actgatgcctcaatgggttcaattactccgatttccttaacagctaatatgcaaggagct
acagatgtgtttccttcccaatcttcgaactctggcataattcagtcctcttcctcaggg
cagatatcaaaagataccctctctggagcaattagaagagacaaaggtggtgcccaacca
caaaaaagttctgcagtcctaagtcaagcttggaaggaggatctggatgcaggtcatctg
ttgacatcactgttcgagttatttggtgaaggcatattctctttcacacagccagcggag
atgtcgttctttctatag |
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