Typha angustifolia (narrow-leaf cattail): 140767050
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Entry
140767050 CDS
T11061
Name
(RefSeq) probable beta-1,4-xylosyltransferase IRX14 isoform X1
KO
K20871
putative beta-1,4-xylosyltransferase IRX14 [EC:2.4.2.-]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tang01003
]
140767050
Glycosyltransferases [BR:
tang01003
]
Polysaccharide
Structural polysaccharide
140767050
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_43
DUF4127
DUF4726
Motif
Other DBs
NCBI-GeneID:
140767050
NCBI-ProteinID:
XP_072962904
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Position
9:complement(join(10244178..10244400,10250141..10250647,10250723..10251423))
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AA seq
476 aa
AA seq
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MKPAPPLHHPTRRAAADPSSSSAAAPAVSADSSAVHKPSSSASAFFLLLFHLLSCLLSLF
LGFRFSHLLLLSSSPPIPLLSPPPPSPPPPPPPHLPSQHVTAGRHGILVRPHPHPSPVET
SRAYRILAAVQSEQRRLFKNQPAHQRPLLIITPTYSRTFQSFHLSSLAHSLLLLLPSPLT
WLVVSPADSSNHTIALLARFPSLPVLHLPFPGKIPPTWLARRRAESRMRLHALRVIRERR
LHGVVVFADDSNVHSLEFFDEAKKVNWMGAVSLAILGHESAEIPIQGPVCNTSGHLVGWH
SFNSINYRGRTATFIGEQGVVLPGKMEWAGFAMDARLVWREAEGRPDWVRDLDEVGLSKE
EIESPLDLLKDAAFVEPLGSCGKKVMLWWLRVEARYDSKFPAGWKIGPLEITVPAKRTPW
PDAPPEPPNKQMTIHQNHVERHPAKTGRSSRSRRSSRSKRKHESSTRALEVSHKQN
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccgcgccaccactccaccacccgacccgccgcgctgccgccgacccatcctct
tcctccgccgccgctcccgccgtttctgctgactcctctgccgtccacaaaccctcctcc
tccgcctccgccttcttcttgctcctcttccacctcctctcctgcctcctctccctcttc
ctcggcttccgcttctcccacctcctcctcctctcctcttcccctcccattcccctcctc
tctccccctcctccttctcctcctccgccccctccccctcatctcccctcccagcacgtc
accgccggccgccacggcatcctcgtccgcccccatccccatccttcccccgtcgaaacc
tcccgcgcttaccgcatcctcgccgccgtccaatccgagcagcgccgccttttcaagaac
caacccgctcaccaacgccctctcctaatcatcaccccgacctactcccgcaccttccaa
tccttccacctctcctccctcgcccactccctcctcctcctcctcccctcccctctcact
tggctcgtcgtctcgcccgccgactcctccaaccacaccatcgcccttctcgcccgcttc
ccctccctccccgtcctccacctccccttccccggtaaaatccctcccacctggctcgcc
cgccgccgcgccgagtcccgcatgcgcctccacgcgctcagggttatacgggaacggcgg
ctgcacggagtagtcgtgttcgcggacgactccaatgtgcatagcttggagttcttcgat
gaggcgaagaaggtgaattggatgggggcagtctcgctcgcgattcttgggcatgagagc
gcagagattccgatccaagggccggtgtgtaacacgtctgggcatctggttgggtggcac
agctttaattcgattaactatcgaggtaggactgctacatttattggggaacagggggtg
gtgctgcccgggaaaatggagtgggcggggttcgcgatggatgcaaggttggtgtggagg
gaggctgaggggaggccggattgggtgagggacctcgatgaggtggggttgagtaaggag
gagatcgagagcccactggatttgctgaaggatgcggcgtttgttgagccacttgggagt
tgtgggaagaaggtgatgctgtggtggctccgggtggaagcccggtatgatagcaagttc
ccggctggatggaaaataggtcctctagagattactgttcctgcaaaaagaactccatgg
cctgatgcaccacctgaacctccaaacaaacaaatgaccatccatcagaaccatgtggag
aggcatcctgcaaagacaggcagatcttcgagatctaggcggagctctcggagtaaaagg
aaacatgaatcatcaacacgagccttggaagtttctcataaacaaaactga
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