Typha angustifolia (narrow-leaf cattail): 140767076
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Entry
140767076 CDS
T11061
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140767076
04121 Ubiquitin system [BR:
tang04121
]
140767076
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140767076
Membrane trafficking [BR:
tang04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
140767076
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140767076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
zf-RING-like
Zn_ribbon_8
zf-Nse
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
140767076
NCBI-ProteinID:
XP_072962958
LinkDB
All DBs
Position
9:3939880..3940869
Genome browser
AA seq
329 aa
AA seq
DB search
MSSAGSYAGDVSVAAIKRYFCHQCNHTVLLSPSSSSPGDLSCPDCHGGFIEELNLADQSP
NPTPTPTPYPIDFSDDPYPIRFPNYESPLPFLLSALLDLRGRSPPPSSDPQSFDPVHFLQ
NYLQSLVDGGSNIQVVLDGGGGVGGGLRLGGNIGDYFIGPGLEQLIEQLAENDPNRYGTP
PAAKSVIGSLPDVKVSEEMMATNEECAVCKDAFEVGEAAKQMPCKHVYHKDCILPWLELH
NSCPVCRYELQTDDPDYENRRVHTAGAGSSGGGSFGDGANATDGEEDSRPAERRFNFQLP
WPFGNFGSPSEDSNAENSGGQSGAPSRRT
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggccggatcctacgccggcgacgtctcggtcgcagcgataaagcgatacttt
tgtcaccaatgcaaccacaccgtcctcctctccccctcctcctcctcccccggcgacctc
tcctgccccgactgccatggtggcttcatcgaggagctcaatctcgcagaccagagccct
aaccctacccctacccctaccccttatcctatcgatttctcagatgatccttaccctatt
cgtttccctaactacgaatcccccctcccctttctgctctccgcgctcctcgacctccgc
ggccgctctcctcctccctcctccgatccccaatctttcgaccccgtgcacttcctccag
aactatctccaatctctcgtggacggcggatccaacattcaggtcgtcctggacggcggc
ggcggcgttgggggcgggttacggctcggtggcaacatcggagactacttcatcggcccc
gggcttgagcaattgatcgagcagctggcggagaacgatccaaaccgttacgggactcca
ccggcggcgaaatccgtgatcggatcgttgccggatgtgaaggtatcggaggagatgatg
gcgaccaatgaggagtgcgctgtctgcaaggatgcgttcgaggtcggggaggctgctaag
cagatgccttgcaagcatgtataccataaggattgcatcctcccgtggcttgagctgcat
aattcttgcccggtttgccgttacgagctgcagacggatgatccggattatgagaaccgg
agagtgcacactgccggtgcggggagttcaggcggggggtccttcggagatggtgctaat
gctactgatggagaggaagattctaggcctgcagagaggaggtttaattttcagctgcct
tggccattcggcaattttggatcaccatccgaagatagcaatgctgagaattcgggtggt
cagagcggtgcgccgagtcgcagaacttga
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